Saccharolobus shibatae: J5U23_02508
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Entry
J5U23_02508 CDS
T07357
Name
(GenBank) DNA topoisomerase VI subunit B
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
sshi
Saccharolobus shibatae
Brite
KEGG Orthology (KO) [BR:
sshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sshi03032
]
J5U23_02508
Enzymes [BR:
sshi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
J5U23_02508
DNA replication proteins [BR:
sshi03032
]
Prokaryotic type
DNA Topoisomerases
J5U23_02508
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c
HATPase_c_3
NFACT_N
Ribosomal_S13
H2TH
DUF2357
HAD_Pex22
HI0933_like_1st
HSCB_C
Motif
Other DBs
NCBI-ProteinID:
QXJ29635
UniProt:
O05207
Structure
PDB
PDBj
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Position
complement(2308648..2310240)
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AA seq
530 aa
AA seq
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MSAKEKFTSLSPAEFFKRNPELAGFPNPARALYQTVRELIENSLDATDVHGILPNIKITI
DLIDDARQIYKVNVVDNGIGIPPQEVPNAFGRVLYSSKYVNRQTRGMYGLGVKAAVLYSQ
MHQDKPIEIETSPVNSKRIYTFKLKIDINKNEPIIVERGSVENTRGFHGTSVAISIPGDW
PKAKSRIYEYIKRTYIITPYAEFIFKDPEGNVTYYPRLTNKIPKPPQEVKPHPYGVDREE
IKILINNLKRDYTIKEFLVNEFQSIGDTTADKILELAGLKPNKKVKNLTEEEITRLVETF
KKYEDFRSPSADSLSVIGEDLIELGLKKIFNPDFAASITRKPKAYQGHPFIVEAGVAFGG
SIPVGEEPIVLRYANKIPLIYDEKSDVIWKVVEELDWKRYGIESDQYQMVVMVHLCSTKI
PYKSAGKESIAEVEDIEKEIKNALMEVARKLKQYLSEKRKEQEAKKKLLAYLKYIPEVSR
SLATFLASGNKELVSKYQNEISEGLFKLISKKLDLINIEEYRKVYRVDSE
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctaaagaaaagtttacaagcttatcccctgcagaattctttaaaaggaatccg
gagctggccggattccctaatccagcgagggctctttaccaaacagttagagagttaata
gagaactcgctggacgctaccgatgtgcacgggatattgcctaatattaagattacgatt
gacttaattgacgacgctaggcaaatatataaagttaatgtggttgacaatggaataggt
attcctccccaggaggttcccaatgcctttggtagagtattatacagttcgaaatatgta
aataggcaaactaggggtatgtatggtctaggtgtaaaggcagctgttctctatagccaa
atgcatcaagataagcccatagaaatagagacttccccagtaaattctaaaagaatatac
acttttaagttaaaaattgatataaataagaacgagccaataattgtagaaaggggatct
gtggaaaacactaggggttttcatggaacgtccgtggcaatttctataccgggagattgg
cctaaagctaaatcaagaatttacgagtatattaagaggacttacattattaccccttac
gcagaatttatcttcaaagatcctgaaggaaatgtaacgtattatccgagattaacaaat
aagattcctaagccgccacaagaagttaagcctcatccctatggagtagatagggaagaa
ataaagatactaataaataatctaaagagagactataccataaaagaatttttggtaaat
gaatttcaaagtataggggatactactgcagataagatcctagaattagctggattaaag
cccaataagaaagttaagaacctaacagaagaggaaataactaggttagttgagactttt
aaaaagtatgaggattttagatccccatcagcggattcactttctgtaataggggaagat
ttaattgaattaggtttaaaaaagatttttaatccagactttgcagcctctataactagg
aaacctaaagcttaccaagggcatccattcatagttgaagcaggtgtcgcatttggcggt
agtatacccgttggtgaagagcctatagttttaagatatgccaataagattccgttaatt
tacgacgagaaatcagatgtcatatggaaagtcgttgaagagctggattggaaaaggtat
ggtattgagtcggatcaatatcaaatggtggtaatggttcatttatgtagtaccaagata
ccatataagagtgctggaaaggaaagtatagctgaagtagaggatatagagaaggaaata
aagaacgcattgatggaagtcgcacgaaaacttaaacagtatttgagtgagaagagaaag
gaacaagaagctaagaagaaattacttgcgtatttaaaatatataccagaggttagcaga
tctttagcaacctttttagcatctggcaataaagagttagtatctaagtaccagaatgag
atctcagaaggtttatttaaacttatttctaagaaattagatttgattaacattgaagaa
tatagaaaggtctatagggtggatagtgaatga
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