Saccharolobus shibatae: J5U23_02616
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Entry
J5U23_02616 CDS
T07357
Name
(GenBank) DNA primase, phage associated
KO
K06919
putative DNA primase/helicase
Organism
sshi
Saccharolobus shibatae
Brite
KEGG Orthology (KO) [BR:
sshi00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
J5U23_02616
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Gene cluster
GFIT
Motif
Pfam:
DUF5906
pRN1_helical
D5_N
Prim-Pol
Pox_D5
RFX_DNA_binding
Motif
Other DBs
NCBI-ProteinID:
QXJ29740
UniProt:
A0A8F5BR05
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Position
complement(2408966..2411563)
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AA seq
865 aa
AA seq
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MSERLQWAKWFIDHGFAIFPIAPGTKISVIKGWEKYSTTPLTDEEKKQYLEMIEKGYNYA
VPGGQKNLVILDFENKELLKSWISEDELNKLCSKTLCVDTPHGGLHVYVTADDIPEHKFN
PVFTKDGKGIADLQSFSSYVLGPESCINHKHCNTDKCPWKGQDYTTCYIPLNNNEIMKAD
LKGLLRFLAEKGKKLGIELSSSARGWVGGKKKDGQKNTEDKEYEELIAELKKKNRFKSVE
EAKNEICEKLKHDSVEYKVICEGKTYADVGIDRSRGDFRVIKTLLYHGLRDPDLILQVLP
EDSKAKNNEKWDSRKYFLVTLKNAWSVVSKYLEAKKVSEKDKSKAKQIMIEAIAEEITRE
HRLVTFKGRDQVKEWVIGLFRFSKKKGIYEPFDVTIEEVINNKLEEYKDFPLGSDKSRVV
RNIKEEIMRRTLIPLVKEPMRIAFRNGTLEWNEKGIIWYDTKERTPRVYAFHYIPWNVKI
DEIMRFERKEITVQDIEELASRLCPRAFEVFKQWVDDKWVLLFEIIGYTLYPRYDFNKAI
LLVGNGSDGKTTFLNLLLTILGKDNVSAVSLKRIMEGDKFASIELYHKLANISAELFAFR
VTNTDIFKKLTGGDYIEGQKKFKDPIYFINYAKLINSTNELPIVKDQTYGFWRRWLAIEF
PHQFKIEPFFNKVFTKDEIEGIITVAILAFARVIQQKKFDFEDSSADIKEKWERASDSVY
AFIKDLIESGKVEYDPKNGDLFVSVKKLYSMYTEWCDENEKTPEPQSTFTKRLESRFRIV
KQRKRIGGERDWCYVGIKLKEDNTGGNDSVGVSNSLIELYSQYKGKVRSMKDLQDELGLR
AFELLDWCEKRNLCRWIDEEHMEFS
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgagagactgcagtgggctaagtggttcatcgaccacggctttgctatcttcccc
attgccccagggaccaaaatatcagtgatcaaaggttgggaaaaatatagcacgacacct
ctgactgatgaagagaagaaacaatacctggagatgattgagaagggttacaactatgca
gtaccgggcggtcagaagaacttggtaatcttagactttgagaataaggaactgctgaaa
tcgtggattagtgaagatgaacttaacaaactgtgcagtaagactctctgtgtcgataca
cctcacggtggacttcatgtttacgtcactgctgatgacattccagagcacaagtttaac
cccgtgtttactaaagacggcaaagggatagctgacctacagagctttagcagttatgtg
ttaggaccagagtcgtgcattaaccataagcactgcaatactgacaagtgtccatggaaa
ggacaagactacaccacgtgctatatcccattaaataataatgaaataatgaaagctgac
ctcaaaggtttgttgaggtttttggctgaaaagggtaagaagttagggattgagttaagc
agttcagcacgggggtgggttggtggtaagaaaaaagatggtcaaaaaaatacggaagat
aaggaatatgaggagttaattgctgaacttaagaagaagaacagattcaagagtgttgaa
gaagctaaaaacgagatttgtgaaaagcttaagcacgatagtgtggagtacaaagttatt
tgtgaaggtaaaacttatgctgatgtagggattgataggagtcgtggggacttcagagta
attaaaacactgttatatcacgggcttagggacccggatctaatactccaggttttaccg
gaagactctaaggctaagaataacgagaagtgggattcacgtaaatacttcttggttacc
ctcaaaaacgcgtggagtgtagtatcaaagtatcttgaagctaagaaggtatcggaaaag
gacaagtccaaggctaaacagataatgattgaggctattgctgaagaaatcacgcgtgag
cacagacttgtaacgtttaagggaagagaccaggttaaggagtgggtaattggtctattt
aggtttagtaagaaaaaggggatttatgagccctttgacgtgactatagaggaagtaatt
aataataaattagaggagtataaggacttcccattaggttctgataagtcacgtgtcgtg
aggaatattaaagaggagataatgaggagaacacttataccattagtaaaagagcctatg
aggatagcatttaggaatggtaccctggaatggaatgagaagggcataatatggtatgat
acaaaggagaggacaccacgcgtgtatgctttccattacataccatggaatgttaagatt
gatgaaataatgaggtttgagaggaaggagataacagtacaagatattgaggagttagca
tcacggctttgccccagggcatttgaggtgtttaagcagtgggttgacgataagtgggta
ctcctatttgagattataggatatacactttacccacggtatgactttaataaggcgata
ttacttgtgggtaacggttcagatggaaaaactacattcctaaaccttctactaacgatt
cttggtaaagataatgtttctgcagtatctttaaagaggattatggagggggacaagttt
gcttccattgagctataccataaacttgcgaatattagtgctgaactctttgcattcagg
gtaactaatactgatatatttaagaaactcacggggggcgactatattgagggacaaaag
aagttcaaagaccctatatatttcataaattatgctaaactgatcaactcaacgaatgaa
ttgccgatagtaaaagaccagacttatggtttctggaggagatggttagcaatagagttc
ccacaccaattcaagatcgaaccgttctttaataaggtatttacaaaagacgagattgag
ggaataatcacggtggcgatattggcttttgcacgcgtgattcagcagaagaagtttgat
tttgaggatagtagtgcagatattaaagagaagtgggaaagggcttcagattctgtttat
gcgttcattaaagacctaattgagagtgggaaagtagaatatgaccctaagaacggcgat
ttgtttgtgtctgtgaagaagttatatagtatgtatactgagtggtgtgatgagaatgag
aaaacgcctgaacctcaaagcacattcacgaaaagacttgagagtagattcaggatagta
aaacaaaggaaaaggataggtggtgaaagggattggtgttatgttggaattaaactaaag
gaggataacacgggggggaatgatagtgtgggtgtgtctaattcattaatagagttatat
tcacaatataagggcaaagttagaagtatgaaggacttacaagatgagttaggactcagg
gcttttgaactattggattggtgtgaaaagaggaatttatgtagatggatagatgaagaa
catatggaattcagctga
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