KEGG   Saccharolobus shibatae: J5U23_02681
Entry
J5U23_02681       CDS       T07357                                 
Name
(GenBank) ATP-dependent RNA helicase, eIF-4A family
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
sshi  Saccharolobus shibatae
Pathway
sshi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sshi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    J5U23_02681
   03460 Fanconi anemia pathway
    J5U23_02681
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sshi03032]
    J5U23_02681
   03400 DNA repair and recombination proteins [BR:sshi03400]
    J5U23_02681
DNA replication proteins [BR:sshi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    J5U23_02681
DNA repair and recombination proteins [BR:sshi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     J5U23_02681
SSDB
Motif
Pfam: ERCC4 HHH_5 HHH_2 IMS_HHH_1
Other DBs
NCBI-ProteinID: QXJ29797
UniProt: A0A8F5BQX8
LinkDB
Position
2454366..2455067
AA seq 233 aa
MVIRIYADDREKASGIPELLKELGITVILSQLSVADYVIGEDAAVERKSVNDLVNSVFDK
RFFDQISRLSEVYNFPMLIVEGDINEIRKITEKWRAINNALISATIDYNIKVFYSRDKKD
TAEILKKIAEKYQFGENGSRRINLHNKAKLESISDMQLYIVESFPYVGSVLAERLLLKFG
TIQNICNASISELEKALGSRKKAEDIYKILRAHYSKTNADNDSKKSTSLFDFL
NT seq 702 nt   +upstreamnt  +downstreamnt
atggtaattagaatttatgctgatgatagggaaaaggctagtggtataccagaattatta
aaggagttgggaattacagtaatactatctcaacttagtgttgctgattatgtgataggt
gaagatgctgcagtagagaggaagtcggtaaatgatttggtaaattcggtttttgacaag
aggttttttgaccaaatcagtaggctttcagaggtttataattttccaatgttaattgtt
gaaggtgatattaatgaaattaggaaaataactgaaaagtggagagcgataaataacgct
ttaatttctgccacgattgattataatattaaagtattttattctagagataaaaaagat
actgcggaaattttgaaaaaaatagcagagaagtatcaattcggcgaaaatgggagtagg
agaattaatttacataataaggctaaactagaaagtatttctgatatgcaactttatatt
gtagaatcttttccttatgttggttctgtacttgctgaaaggctactacttaagtttgga
actatacagaatatttgtaatgcatctatatcagaattggaaaaagcattaggtagtagg
aaaaaagctgaggatatttataaaattttaagggcacactattctaaaactaacgctgat
aatgatagtaagaaaagtacctctttatttgacttcctttaa

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