Saccharolobus shibatae: J5U23_02991
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Entry
J5U23_02991 CDS
T07357
Name
(GenBank) Transcription initiation factor B
KO
K03124
transcription initiation factor TFIIB
Organism
sshi
Saccharolobus shibatae
Pathway
sshi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sshi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
J5U23_02991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sshi03021
]
J5U23_02991
Transcription machinery [BR:
sshi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
J5U23_02991
Prokaryotic type
Archaeal type
TFB
J5U23_02991
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Sigma70_r4
HTH_AsnC-type
HTH_Tnp_ISL3
HTH_24
Sigma70_r4_2
HTH_Crp_2
ORC6_2nd
HTH_11
RB_B
NikA-like
Motif
Other DBs
NCBI-ProteinID:
QXJ30100
UniProt:
P50387
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All DBs
Position
2701845..2702765
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AA seq
306 aa
AA seq
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MSEENKSVSTPCPPDKIIFDAERGEYICSETGEVLEDKIIDQGPEWRAFTPEEKEKRSRV
GGPLNNTIHDRGLSTLIDWKDKDAMGRTLDPKRRLEALRWRKWQIRARIQSSIDRNLAQA
MNELERIGNLLNLPKSVKDEAALIYRKAVEKGLVRGRSIESVVAAAIYAACRRMKLARTL
DEIAQYTKANRKEVARCYRLLLRELDVSVPVSDPKDYVTRIANLLGLSGAVMKTAAEIID
KAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQKEIAQVAGVTEVTVRNRYKELTQELK
ISIPTQ
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgaagaaaataaatctgtatctactccttgccctcccgataaaattatattcgat
gcggagaggggggaatatatttgctctgaaactggagaagttttagaagataaaattata
gatcaaggaccagaatggagggcatttactccagaagagaaggaaaagagaagcagagtt
ggaggacctttaaataatactattcacgataggggcttatccactcttatagactggaaa
gataaggacgcaatgggaagaaccttagaccctaagagaagactcgaagcgttaagatgg
agaaagtggcaaataagggctaggatacaaagttctatagataggaacttagcacaagct
atgaatgaattagaaagaattgggaacttactgaacttgccaaaatcagttaaggatgag
gctgcactaatctacagaaaagcagtagagaaagggttagtaagaggaaggagtatagaa
agcgttgtagcagctgccatatacgcagcatgtagaaggatgaagttagctagaacttta
gatgagatagctcagtatactaaggcaaataggaaagaagtagctagatgctatagacta
ttacttagagagttagatgttagtgtgccggtaagcgatccaaaggattacgtaactaga
atagctaacttgttaggtctaagcggagctgttatgaaaacagctgccgaaattatagat
aaggcgaagggttctggtttaactgctggtaaggatccagctggcttagccgcagctgcg
atttatatagcgtcattattacacgatgaaagaagaacccaaaaagaaatagcgcaagtt
gcaggcgttactgaagttactgtgagaaataggtataaagaacttacacaagaactaaaa
atttcaatacctactcaataa
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