Saccharolobus shibatae: J5U23_03180
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Entry
J5U23_03180 CDS
T07357
Name
(GenBank) RNase L inhibitor
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
sshi
Saccharolobus shibatae
Brite
KEGG Orthology (KO) [BR:
sshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sshi03009
]
J5U23_03180
Ribosome biogenesis [BR:
sshi03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
J5U23_03180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
Fer4_RLI
AAA_21
Fer4
AAA_14
AAA
Fer4_10
Fer4_2
nSTAND3
Fer4_6
AAA_16
Fer4_7
AAA_18
AAA_23
Fer4_9
RNA_helicase
Fer4_21
Fer4_16
NACHT
Rad17
VapE-like_dom
AAA_24
Fer4_4
KAP_NTPase
dNK
DEAD
NB-ARC
Fer4_17
Fer4_8
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
QXJ30282
UniProt:
A0A8F5BRT7
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All DBs
Position
2855601..2857403
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AA seq
600 aa
AA seq
DB search
MRVAVINYDFCKPDKCNLECINFCPVDRSGGKAIELSDIVKGKPVIYEETCIGCGICVKK
CPYEAISIVNLPDELEGEVIHRYKVNGFKLFGLPTPKNNTILGVLGKNGVGKTTVLKILA
GELIPNFGDPNSELGKDEVLKRFRGKELYNYFKELYNNGLRIVHKIQYVEYASKFLKGTV
NEILTKVDERGRKDEVKELLNMANLWNKDANVLSGGGLQRLLIGASLLREADVYIFDEPS
SYLDVRERMNMARAIRELLKNKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAA
RVGINNFLKGYLPAENMKIRPDEIRFMLKEVSDLDLSKDLKTKMKWTKIVKKLGDFQLVV
NEGEAKEGEIIGILGPNGIGKTTFARILVGEISADEGSVTPEKQILSYKPQRILPNYDGT
VQQYLENVSKDALSTSSWFFEEVTKRLNLHRLLESNVNNLSGGELQKLYIAATLAKEADL
YVLDEPSSYLDIEERYIVAKAIKRVTRERKAVTFIVDHDLSIHDYIADRIIVFKGEPEKA
GFATSPVTLKTGMNEFLRELEVTFRRDAETGRPRVNKIGSYLDRVQKERGDYYSMVLSTQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
gtgagagttgccgtaataaattatgacttttgtaagccagataaatgtaacttagaatgt
ataaacttctgtcctgttgatagatctggaggaaaagcaatagaactatcggacatcgtt
aaagggaaaccagtaatttatgaagaaacttgtataggttgtggaatatgtgtgaagaaa
tgtccatacgaagcgatatcgatcgtaaacttgccagacgagttggaaggggaggttata
cacagatacaaagtaaatggatttaaattgtttggcttaccaacgcctaaaaataatacg
atattaggagtattaggaaagaatggagtagggaaaactacagtgcttaaaatactggct
ggtgagttaattccgaattttggggatcctaattccgaattaggaaaggatgaagtatta
aaaaggtttagaggtaaggaattatataattattttaaggaattatataataatgggtta
agaatagtacataagattcaatacgttgaatacgcttcaaaattccttaaaggtacagta
aatgaaattttgacaaaggtagacgaaagagggagaaaagatgaagttaaagaacttcta
aacatggctaatctttggaataaggatgctaatgtactttctggaggaggtcttcaacga
ttactaataggtgcttcattattgagagaagcagatgtatatatatttgacgaaccttct
tcttatctagacgttagggaaagaatgaatatggctagagcaattagagaattactaaag
aataaatacgttatagttgttgatcatgacttgatagttttagattatcttacagatctg
atacacataatttatggagaaagttcagtatatggaagggtgtcaaaatcatatgcagcg
agagttggtataaataattttctaaaaggatatttaccagcggaaaatatgaaaataaga
ccagacgaaataaggtttatgctaaaagaggttagtgatttagatctctctaaagatcta
aaaacaaaaatgaaatggactaagatagtcaagaagttaggtgattttcagctagtagta
aatgaaggagaggctaaagagggagaaataatcggaattttaggaccaaacgggatagga
aagacaacttttgcaagaatattagttggtgaaatttcagcagatgaaggctctgtaact
cctgaaaaacaaatattatcttataaaccacaacgaattttacctaattacgatggaaca
gttcaacagtacttagaaaacgtaagcaaagatgcgctctctacgtcatcatggtttttc
gaggaagtgactaagagacttaacttacataggttactagagtctaatgtgaataaccta
agtggaggtgagttacagaaattatatatagctgcgactttagcgaaagaggctgatctt
tatgttttagatgaaccttcctcttatctcgatattgaagagagatatatagttgctaaa
gctataaagagagtcacgagagagagaaaagcagtaacttttatcgtagatcatgatctt
tcaatacatgactacatagcggatagaattatcgttttcaaaggagagccagagaaagcc
ggatttgccacatctccagtaacgctaaaaacgggaatgaatgaatttttgagagaatta
gaggtaacgttcagaagagatgctgagactggcagacctagagtaaataagatagggagt
tacttagatagggtccagaaagaaagaggagactattactccatggttctttctacccag
taa
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