Streptomyces alfalfae: A7J05_04485
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Entry
A7J05_04485 CDS
T05110
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
ssia
Streptomyces alfalfae
Pathway
ssia03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ssia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
A7J05_04485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssia03400
]
A7J05_04485
DNA repair and recombination proteins [BR:
ssia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
A7J05_04485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Rho_N
Motif
Other DBs
NCBI-ProteinID:
APY85090
LinkDB
All DBs
Position
complement(1208411..1209406)
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AA seq
331 aa
AA seq
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MARSIWSGVLTFGLVTVPVGLFTATEDHTIHFHQLQRGTGDRIRYKRINERTGEEVPTDD
IVKGYDLGQGDYVVVEPEELDDIAPGKSKVIDMTGFVDLDRIEPVYFDRTYYVAPRGKEY
VKVYELLRAALERSNKAGIATFTMRSKQYLTALRAQDDVLVMHTMRWADEVRDPREDLDV
MPARRPEVADRELRTAQQLIDALSIDWDPNDYHDTYEERVKELVAAKREGKEVVGEEGPP
DATNVVDLMSALERSVERNRGGGKSKGKDGRRKAPAKTRKRPDEDLSSLTKSELYRRATD
ADVPGRSKMSREQLVEALTGRKARKGRKAAA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcgagatcgatctggagcggggtgctgaccttcgggctggtcacggtccccgtgggc
ctcttcaccgcgaccgaggaccacaccatccacttccaccagctccagcggggcaccggc
gaccgcatccgctacaagcggatcaacgagcgcaccggcgaggaagtgcccaccgacgac
atcgtgaagggctacgacctcggccagggcgactacgtcgtcgtcgaacccgaggaactc
gacgacatcgccccgggcaagtcgaaggtcatcgacatgacgggcttcgtcgacctcgac
cggatcgagcccgtgtacttcgaccggacctactacgtcgcgccgcgcggcaaggagtac
gtcaaggtctacgagctgctgcgggcggccctcgaacggtcgaacaaggcgggcatcgcc
accttcacgatgcgcagcaagcagtacctcaccgccctgcgcgcccaggacgacgtcctg
gtgatgcacacgatgcgctgggcggacgaggtgcgcgacccgcgcgaggacctggacgtg
atgccggcccggcgccccgaggtcgccgaccgtgagctgaggacggcccagcagttgatc
gacgccctcagcatcgactgggacccgaacgactaccacgacacgtacgaggagcgcgtc
aaggaactcgtcgcggccaaacgcgagggcaaggaggtggtcggcgaggaagggccgccc
gacgccacgaacgtcgtcgacctgatgtcggcgctggagcggagcgtcgagcgcaaccgg
ggcggaggcaagagcaagggcaaggacggccgccgcaaggccccggcgaaaacgaggaaa
cggccggacgaggacctgtcctcgctcaccaagagcgagctgtaccggcgcgcgaccgac
gccgacgtcccgggccgctcgaagatgagccgggagcaactggtcgaagccctcacgggg
cgcaaggcgcgcaaggggcggaaggccgcggcctga
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integrated database retrieval system
