Streptomyces alfalfae: A7J05_04920
Help
Entry
A7J05_04920 CDS
T05110
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ssia
Streptomyces alfalfae
Pathway
ssia00040
Pentose and glucuronate interconversions
ssia01100
Metabolic pathways
ssia02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssia00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
A7J05_04920
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A7J05_04920
Enzymes [BR:
ssia01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
A7J05_04920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
APY85157
UniProt:
A0A1P8TC14
LinkDB
All DBs
Position
1305156..1306277
Genome browser
AA seq
373 aa
AA seq
DB search
MSRARSRRVHATLAALAVTAATGAAVTLPEAAAQPRASAVAGGADGYATQNGGTTGGAGG
KTVRATTGTAIHAALCDRAAADTPVTIEVEGTINHANTKKVSGESCNTAAGVIELKQISN
VTLVGVGSGAVFDQLGIHIRDSHNIIIQNVTVRNVKKSGSPTSNGGDAIGMESDVRNVWV
DHTTLEASGGESEGYDGLFDMKDNTRYVTLSYSVLRDSGRGGLVGSSESDVSNGFITYHH
NKYENIDSRTPLLRGGTSHIYNNYYVRLNESGINSRAGAKAKVDHNYFKDSKDVLGTFYT
DAAGYWQVSGNTFDRVTWSPADDEYDPAGPNPTSNTTVSIPYPYTLDSAGCVPDVVGRTA
GAGTGLKVSDGRC
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgagccgagcacgttcacgcagagtgcacgccacactggccgcgctggccgtcacagcc
gcgaccggtgcggcggtgacgctgccggaagcagccgcgcagccgcgggcctcggccgtg
gccggcggcgccgacggctacgccacgcagaacggcgggaccaccggcggcgcgggcggg
aagacggtgcgggccacgaccggcaccgcgatccacgcggccctgtgcgaccgcgccgcc
gccgacaccccggtcaccatcgaggtggagggcacgatcaaccacgccaacaccaagaag
gtctcgggcgagagctgcaacaccgccgccggcgtcatcgagctcaagcagatcagcaac
gtcacgctcgtgggcgtcggcagcggcgcggtcttcgaccagctgggcatccacatacgg
gactcccacaacatcatcatccagaacgtgaccgtcaggaacgtcaagaagtccggctcc
cccacgtccaacggcggcgacgccatcggcatggagagcgacgtccgcaacgtctgggtg
gaccacacgaccctggaggcgtcgggcggggagtcggagggctacgacggcctcttcgac
atgaaggacaacacccggtacgtcaccctgtcgtacagcgtcctgcgcgactccgggcgc
ggcggcctcgtgggctccagcgagagcgacgtctcgaacggcttcatcacgtaccaccac
aacaagtacgagaacatcgactcccgtacgccgctgctccgcggcggcacgtcccacatc
tacaacaactactacgtgaggctgaacgagtccggcatcaactcccgcgccggggccaag
gccaaggtggaccacaactacttcaaggactccaaggacgtcctgggcacgttctacacc
gacgcggccggctactggcaggtcagcggcaacaccttcgacagggtgacctggtccccc
gccgacgacgagtacgacccggcgggcccgaacccgacgtccaacaccacggtgagcatc
ccctacccgtacaccctcgacagcgccggctgcgtgccggacgtcgtgggcaggacggcg
ggagcgggcaccggcctgaaggtgtcggacgggcgctgctga
DBGET
integrated database retrieval system