Streptomyces alfalfae: A7J05_06680
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Entry
A7J05_06680 CDS
T05110
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ssia
Streptomyces alfalfae
Brite
KEGG Orthology (KO) [BR:
ssia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssia03400
]
A7J05_06680
Enzymes [BR:
ssia01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
A7J05_06680
DNA repair and recombination proteins [BR:
ssia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
A7J05_06680
Prokaryotic type
A7J05_06680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
APY85443
LinkDB
All DBs
Position
complement(1728147..1729523)
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AA seq
458 aa
AA seq
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MKTSVVLFTSDLRVHDHPPLRAAVARADAVVPLFVRDRAIADTGFAGPNREAFLADCLAD
LDRRLRERGGRLVVRGGDVVDQVRAVMAETDATELHLSGGVSGYAHARERRLRAALERDG
GELLVHDGVITALPPGAVTPAGRDHFAVFTPYHRQWCAQRPRDVLGPPRGVRVPDHVGSE
PVPGRDGVEGVSPGLARGGESVGRARWKAWLRDGIDAYGEGGQDDLAGDATSRLSPHLHF
GTVSATELVRDARRRQGEGAENFVRQLCWRDFHHQVLAARPAAASRDYRTREDRWRTERT
AAEDIRAWQEGRTGYPIVDAAMRQLLHEGWMHNRGRLLTASFLTKTLYVDWRVGARHFRR
FLVDGDLADNQLNWQWIAGTGTDSRPNRVLNPVRQGHRYDPSGDYVRRWVPELAEVAGGA
VHEPWKLPAAQRARLGYPEPVVDLAEGLARFRRARGIE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaagacctcggtcgtcctcttcacctccgacctgcgcgtgcacgaccatccgccgctg
cgcgccgccgtggcccgcgcggacgccgtggtgccgctcttcgtccgcgaccgggccatc
gcggacacgggcttcgccgggcccaaccgcgaggcgttcctcgccgactgcctggccgac
ctggaccggcggctgcgcgagcggggcggccggctcgtcgtccgcggcggtgacgtcgtc
gaccaggtgcgcgcggtcatggcggagacggacgccacggaactccacctgtccggcggc
gtcagcggatacgcccacgcccgcgagcggcggctgcgggcggccctggaacgcgacggc
ggggaactgctcgtccacgacggcgtgatcaccgcgctgccgccgggcgcggtgaccccg
gcgggccgcgaccacttcgccgtcttcaccccgtaccaccgccagtggtgcgcccagcgg
ccgcgggacgtcctcgggccgccgcgcggcgtgcgcgtccccgaccacgtcggctcggag
cccgtccccggccgggacggcgtcgagggcgtctcgccggggctcgcgcggggcggcgag
agcgtgggcagggcccggtggaaggcgtggctgcgggacggcatcgacgcgtacggggag
ggcggccaggacgatctggcgggcgacgccacctcgcggctctcgccgcatctgcacttc
ggcacggtctccgcgaccgaactcgtccgcgacgcccgccgccgccagggcgagggcgcc
gagaacttcgtccggcagctctgctggcgcgacttccaccaccaggtgctcgcggccagg
ccggcggcggcgtcccgcgactaccgcacgcgcgaggaccgctggcgcaccgagcggacg
gcggccgaggacatccgcgcgtggcaggagggccgcacgggctatccgatcgtcgacgcc
gcgatgcggcagctgcttcacgagggctggatgcacaaccgcggcagactgctgaccgcg
agcttcctgaccaagacgctgtacgtcgactggcgggtgggcgcccggcacttccggcgg
ttcctggtcgacggggacctggccgacaaccagctcaactggcagtggatcgcgggcacc
ggcaccgacagccgacccaaccgcgtgctcaaccccgtgcgccagggccaccggtacgac
ccgagcggggactacgtacggcggtgggtgcccgagctggcggaggtcgcgggcggcgcg
gtgcacgagccgtggaagctgccggcggcccagcgggcgcgtctcggctacccggagccg
gtcgtcgacctcgcggaagggctggcgcggttccggcgggcgcgggggatcgagtga
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