KEGG   Streptomyces alfalfae: A7J05_07455
Entry
A7J05_07455       CDS       T05110                                 
Name
(GenBank) CRISPR-associated endonuclease Cas3''
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
ssia  Streptomyces alfalfae
Brite
KEGG Orthology (KO) [BR:ssia00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ssia02048]
    A7J05_07455
Enzymes [BR:ssia01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A7J05_07455
Prokaryotic defense system [BR:ssia02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    A7J05_07455
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 DEAD Cas3_C AAA_22 Helicase_C nSTAND_NTPase5 Y4lR_N HD LigB
Other DBs
NCBI-ProteinID: APY85567
UniProt: A0ABM6GP53
LinkDB
Position
1882783..1885650
AA seq 955 aa
MLKLDEAGASGDCVLDVRLWGKESGLSQPYPVVCHLLDTSAVFEVLWDVVLSDETKAAIA
DALGLSVAEARSVVSFWAGLHDIGKITPPFQAQVPFLYKPIREDPAYVSALSAEDEKGFR
HEIASHWSLYELFTKAGYSGSGRLLHRSMSHQIAQLLGGHHGVFGAVLKAKEAARASDYN
PGLGRSGWAEQRQVHFDELRRATGASAIPRGGLPAGLAVVVAGLVVVADWLASQTSAIGP
RVPGPGWSGTAAEVDGHWQAAKQAAPEVVRAARLGRASFSTGEFGAMFPFAPNSLQQDLV
EHLPALVQEHGPGLVLVTAPTGDGKTEAALFAASLLGRAVGARGLYFALPTMGTADAMLP
RVAAFAGRALSGERALMLLHSMAWLSSPGSDNCADVPDGQGGVGAVSAGRETAVEADGWL
RGAKRGLLAPLGVGTIDQALSAVLPLRYNVLRLLGLSDKVFVVDEAHAYGPWMHQLLVRL
LEWLGEMRAPVVLLSATLTGRTAGSLVDAYRRGAGIREPSHVVPRYPGWLFASRAPGVVP
PARGTQSNRARTLTVTHRPVVWDASDPADAPTREGGRRAALREALAPVAAEGGTALVCCT
TVGEAQQTYRDVCAAFPQLAASPGGVRLLHSRYPAGERAKITAQCEAAYGKPGGGPFSVR
PGSVLVATQVVEQSLDFDFDLVVSDLAPLAQLLQRAGRGRRHQRGSLGRPGWAAAENEPE
LVVLDPLADSEKPAPPRSWGTVYDAGLLLRTSRTLRECARSGIAVPGDVQRLVDEVYEEE
FVDRLEAAAHEELVRLDQERMAGEAAERHLAAWTSICSPADVKGDLSKLSAREAGVTQEL
LTTRLGADTGRVLCLYEQTDGTTTLDPQGKVDVPGGGRHGLRAAELADVARRVAPVPGRW
LRGDASDAAASQKWGTHPSLRDLVLLRMSPAADGRWTCNHGRYTISISDVGLEAQ
NT seq 2868 nt   +upstreamnt  +downstreamnt
atgctgaagctcgacgaggcgggagcctcgggggactgtgttctggatgttcggctgtgg
ggcaaggagagcgggctgtcgcagccgtatccggtggtgtgccatcttcttgataccagt
gcggtgttcgaggtgctgtgggatgtcgttctgagcgacgagaccaaggcggccattgcg
gatgcgctcggcctgagcgtggcagaggcacggtcagtggtctcgttctgggccgggttg
catgacatcggcaagatcactcctccgtttcaggctcaggtccctttcctctacaagcca
attcgcgaggatccggcgtacgtcagcgcgctgagcgccgaagacgagaagggattccgc
cacgagatcgcttcccactggtccctctacgagctcttcacgaaggccgggtattccggg
agcgggcgtctgctgcacaggtctatgagccatcagatcgcgcagttgctgggcggtcat
cacggcgtctttggcgcagtgctgaaggcgaaggaggcggctcgggccagtgattacaac
cccggcctgggtcgcagtggttgggctgagcagcggcaggtgcatttcgacgaactgcga
cgggccacgggggcgtccgcaattcctcgcggtgggttgccagcggggctggctgtagtg
gtggcagggttggttgtggtggcggactggctggcaagtcagacgtctgcgatcggaccg
cgagttcctggccctgggtggtcggggacggcggctgaggtggatggacattggcaggct
gcgaaacaagcagcaccggaggtggtgagggctgcgcgtctgggccgagccagtttctcc
accggagagttcggcgcaatgttccccttcgctcccaacagcttgcaacaagatctcgtg
gaacatcttcccgcgctggtgcaggagcacggtccgggtctggtgctggtgacggctccg
acgggtgacggcaagacggaggcggctctgttcgcggcctctctgctggggcgggcggtc
ggcgcccgagggctgtatttcgcgctgccgacgatgggcaccgcggacgcgatgctgccg
cgagtggcagcgttcgccggtagggcgctgtctggcgaacgagcgctgatgctgctgcat
tcgatggcgtggctgagttcaccgggcagcgacaactgtgctgacgtgccggacggtcag
ggcggtgtcggcgccgtgagcgcggggagggaaaccgcggttgaggcggacggatggttg
cggggtgcgaagcgtggattgctcgccccgctgggtgtggggacgattgaccaggctctg
agtgcggtgctcccgttgcggtacaacgtgctgcgtctgctggggctgtcggacaaggtg
ttcgtcgtcgacgaggcgcacgcgtacgggccgtggatgcatcagcttctggtgcggctg
ctcgaatggctgggtgagatgcgtgcaccggtggtgttgctgtccgccacgctcacgggc
cgcacggccggctccctggtggacgcctaccgacgtggtgccggaattcgcgagccgtcg
catgtggtgccgcgttatcccggctggctgttcgccagtcgagccccgggggtggttccg
cccgcgcgcggcacgcagagcaatcgtgcacggacgttgacggtaacccatcggccggtg
gtctgggacgcctcggacccggccgacgcgccgacgcgcgagggcggtaggcgtgcggcg
ctgcgggaggcactggcacctgtggccgcggaaggtggtaccgccctggtgtgctgcacg
acggtgggcgaggcccagcagacctatcgggatgtctgtgcggctttcccgcagcttgcg
gcctccccaggcggggtgcgactgctgcactcccgttacccggcgggcgagcgggcgaag
attacggcccagtgcgaggccgcgtacggaaagccgggagggggcccgttctcggtccgg
ccagggtcggttctggtggcgacgcaggtggtggagcagtccctggacttcgacttcgac
ctggtggtgagcgacctggctccgctcgctcagttgttgcagcgtgccggacgtggacgg
cggcaccagcgtggatctctcggccggccggggtgggcggctgcggagaacgaaccggag
ctggtggtcctcgacccgctggcagactccgagaaacccgcaccgccccgctcgtggggg
acggtttacgacgctgggctgcttctgcgcacgtcgcggactctgcgggagtgcgcgcgg
agcggcatcgcggtccctggtgacgtgcagcggctggtcgacgaggtgtacgaggaagag
ttcgtcgaccggctggaggccgccgcccatgaggaactggtgaggctggaccaggagcgg
atggctggcgaggctgccgagcggcatctggcggcttggaccagtatctgctccccggcg
gacgtgaagggcgatctgagcaagctgtccgcccgagaggcgggggtgacccaggaactg
ctgacgacacgtctgggtgccgacaccggccgtgtgctctgcctgtacgagcagacagac
ggaaccacgacgctcgacccgcaaggcaaggtcgacgtacccggtggaggtcggcacggc
ctccgggcggcggaactggccgatgtcgcacggcgggtggccccggtaccgggccgatgg
ctacgcggtgatgcgtccgatgccgcagcgtcgcagaagtgggggacgcatccctcactg
cgcgatctcgttctgctgcgtatgagccctgctgcagacggacgttggacgtgcaaccac
gggcgctacacgatctcgatatcggacgtcggcctcgaagcccagtga

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