KEGG   Streptomyces alfalfae: A7J05_09580
Entry
A7J05_09580       CDS       T05110                                 
Name
(GenBank) restriction endonuclease
  KO
K19789  DNA repair protein RadD
Organism
ssia  Streptomyces alfalfae
Brite
KEGG Orthology (KO) [BR:ssia00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssia03400]
    A7J05_09580
DNA repair and recombination proteins [BR:ssia03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     A7J05_09580
SSDB
Motif
Pfam: ResIII Helicase_C DEAD AAA_34 ERCC3_RAD25_C Helicase_C_2 DUF7667
Other DBs
NCBI-ProteinID: APY85929
UniProt: A0ABM6GQ26
LinkDB
Position
2396249..2397856
AA seq 535 aa
MSFKALLADAPMAYIRGHVGERLCALLDLIEGGAAGDDRLRAVAPITIDAARLVADEAER
SALIALVPGPKRAELAQRLGSVGDEQPPLDYLQSLKWTADERRELLEFFGFTIDRVPSLP
PAFKQESAPEYGLFPHQRHAAARVKELLYDGPRRTVLHLPTGVGKTRTGMSLICDHLRQH
EPTVVVWLAHGQELLEQAAAEFERAWTKVGDRPLPVLRVWGNTPANLAEMTDGLVVLGLE
KAVSAAKSDPQFLATLAARSTLTVFDEAHQIIAPTFQRVVDELTIRHDASLLGLTATPGR
TWADISKDEELSDYFSRQKVMLEVEGYTNPVTALIEQGYLAKPLMRTVASEAGMQLSAQD
QQLLARSFDIPASMMAELAGDEQWNLKIVQTITELLQQQHRRILVFAASVDHCRLIAAVL
SAAGFDAEFVTGESSPRHRSQVISRFKGSGRRPMVLCNFGVLTTGFDAPAASAAVIARPT
KSLVLYSQMVGRVIRGPKAGGTDTCEIVTVVNPELPGFGDVAEAFTNWEDVWETA
NT seq 1608 nt   +upstreamnt  +downstreamnt
atgtctttcaaggcgctcctcgcggatgcgccgatggcgtacatccgggggcatgtcggc
gagcggctgtgcgctctgctcgatctgatcgagggaggtgcagcgggagacgaccgtctt
cgggccgttgccccgatcaccatcgacgccgcgcgtctggtcgccgacgaggctgagcgc
tccgctctgatcgccctggttccggggcccaagcgggcggagctggcgcagcgcctgggc
tccgtgggcgacgagcagccgccgctggactacttgcagagcctgaagtggacggcggac
gagcggcgagaactgctggaatttttcggtttcacgatcgaccgggtaccgtcccttcct
ccggcgttcaagcaggagtcggctcccgagtacggcttgttcccgcatcagcgtcacgcg
gcggcccgggtcaaggaactgctgtatgacgggccgcggcggacggtgctgcatcttccg
acaggcgtgggcaagacccgcacgggcatgagcctgatctgcgatcacctgcggcagcac
gagcccaccgtggtggtgtggctggcccacgggcaggagctgctggagcaggccgccgcc
gagttcgagcgcgcctggacgaaggtcggcgaccgcccgctccccgtgctgcgggtatgg
ggcaacactcccgcaaaccttgcggagatgaccgacgggctggtcgttctcgggctggaa
aaggccgtctcggcagccaagtcggacccgcagtttctggccaccctcgcggcacgcagc
acgctgacggtcttcgacgaggctcaccagatcatcgcccccaccttccagagggtcgtc
gacgagctgacgatccgtcacgatgcgagcctgctcgggctgaccgccactccgggacgc
acgtgggcggacatctccaaggacgaggaactttccgattacttctcccggcagaaggtc
atgctggaggtcgagggctacaccaacccggtgacggccctgatcgagcagggctacctg
gccaagccgctgatgcggacggtggcctccgaggcgggcatgcaactgtctgcccaggac
cagcagctccttgcgcggtcgttcgacatcccggccagcatgatggccgagctcgcgggc
gacgagcagtggaacctcaagatcgttcagacgatcacggagctgcttcagcagcagcac
cggcgcatcctggtgttcgccgcttccgtggaccactgcaggctcatcgcggccgtgctg
tccgctgccggcttcgatgccgagttcgtgacgggcgagtcctcccctcggcatcgcagc
caggtcatctcgcggttcaaggggtccggccggcgccccatggtgctgtgcaacttcggc
gtcctgacgacaggcttcgacgcaccggcggccagcgcggcagtgatcgcccgtccgacc
aagtccctcgtgctgtacagccagatggtcggccgtgtcatccgcggcccgaaggctggc
ggcactgacacctgcgaaatcgtcacggtcgtgaacccagagcttcccgggttcggagac
gtggcagaagcattcaccaactgggaagacgtatgggagacagcgtga

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