Streptomyces alfalfae: A7J05_09580
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Entry
A7J05_09580 CDS
T05110
Name
(GenBank) restriction endonuclease
KO
K19789
DNA repair protein RadD
Organism
ssia
Streptomyces alfalfae
Brite
KEGG Orthology (KO) [BR:
ssia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssia03400
]
A7J05_09580
DNA repair and recombination proteins [BR:
ssia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
A7J05_09580
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
AAA_34
ERCC3_RAD25_C
Helicase_C_2
DUF7667
Motif
Other DBs
NCBI-ProteinID:
APY85929
UniProt:
A0ABM6GQ26
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Position
2396249..2397856
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AA seq
535 aa
AA seq
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MSFKALLADAPMAYIRGHVGERLCALLDLIEGGAAGDDRLRAVAPITIDAARLVADEAER
SALIALVPGPKRAELAQRLGSVGDEQPPLDYLQSLKWTADERRELLEFFGFTIDRVPSLP
PAFKQESAPEYGLFPHQRHAAARVKELLYDGPRRTVLHLPTGVGKTRTGMSLICDHLRQH
EPTVVVWLAHGQELLEQAAAEFERAWTKVGDRPLPVLRVWGNTPANLAEMTDGLVVLGLE
KAVSAAKSDPQFLATLAARSTLTVFDEAHQIIAPTFQRVVDELTIRHDASLLGLTATPGR
TWADISKDEELSDYFSRQKVMLEVEGYTNPVTALIEQGYLAKPLMRTVASEAGMQLSAQD
QQLLARSFDIPASMMAELAGDEQWNLKIVQTITELLQQQHRRILVFAASVDHCRLIAAVL
SAAGFDAEFVTGESSPRHRSQVISRFKGSGRRPMVLCNFGVLTTGFDAPAASAAVIARPT
KSLVLYSQMVGRVIRGPKAGGTDTCEIVTVVNPELPGFGDVAEAFTNWEDVWETA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcaaggcgctcctcgcggatgcgccgatggcgtacatccgggggcatgtcggc
gagcggctgtgcgctctgctcgatctgatcgagggaggtgcagcgggagacgaccgtctt
cgggccgttgccccgatcaccatcgacgccgcgcgtctggtcgccgacgaggctgagcgc
tccgctctgatcgccctggttccggggcccaagcgggcggagctggcgcagcgcctgggc
tccgtgggcgacgagcagccgccgctggactacttgcagagcctgaagtggacggcggac
gagcggcgagaactgctggaatttttcggtttcacgatcgaccgggtaccgtcccttcct
ccggcgttcaagcaggagtcggctcccgagtacggcttgttcccgcatcagcgtcacgcg
gcggcccgggtcaaggaactgctgtatgacgggccgcggcggacggtgctgcatcttccg
acaggcgtgggcaagacccgcacgggcatgagcctgatctgcgatcacctgcggcagcac
gagcccaccgtggtggtgtggctggcccacgggcaggagctgctggagcaggccgccgcc
gagttcgagcgcgcctggacgaaggtcggcgaccgcccgctccccgtgctgcgggtatgg
ggcaacactcccgcaaaccttgcggagatgaccgacgggctggtcgttctcgggctggaa
aaggccgtctcggcagccaagtcggacccgcagtttctggccaccctcgcggcacgcagc
acgctgacggtcttcgacgaggctcaccagatcatcgcccccaccttccagagggtcgtc
gacgagctgacgatccgtcacgatgcgagcctgctcgggctgaccgccactccgggacgc
acgtgggcggacatctccaaggacgaggaactttccgattacttctcccggcagaaggtc
atgctggaggtcgagggctacaccaacccggtgacggccctgatcgagcagggctacctg
gccaagccgctgatgcggacggtggcctccgaggcgggcatgcaactgtctgcccaggac
cagcagctccttgcgcggtcgttcgacatcccggccagcatgatggccgagctcgcgggc
gacgagcagtggaacctcaagatcgttcagacgatcacggagctgcttcagcagcagcac
cggcgcatcctggtgttcgccgcttccgtggaccactgcaggctcatcgcggccgtgctg
tccgctgccggcttcgatgccgagttcgtgacgggcgagtcctcccctcggcatcgcagc
caggtcatctcgcggttcaaggggtccggccggcgccccatggtgctgtgcaacttcggc
gtcctgacgacaggcttcgacgcaccggcggccagcgcggcagtgatcgcccgtccgacc
aagtccctcgtgctgtacagccagatggtcggccgtgtcatccgcggcccgaaggctggc
ggcactgacacctgcgaaatcgtcacggtcgtgaacccagagcttcccgggttcggagac
gtggcagaagcattcaccaactgggaagacgtatgggagacagcgtga
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