Streptomyces alfalfae: A7J05_09885 Help Entry A7J05_09885       CDS       T05110                                  Name (GenBank) RNA polymerase sigma factor   KO K03086   RNA polymerase primary sigma factor Organism ssia  Streptomyces alfalfae Pathway ssia02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:ssia00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     A7J05_09885  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ssia03021]     A7J05_09885 Transcription machinery [BR:ssia03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      A7J05_09885 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2 Sigma70_r1_1 CDC27 Motif Other DBs NCBI-ProteinID:  APY85981 UniProt:  A0ABM6GQX1 LinkDB All DBs Position complement(2477980..2479521) Genome browser AA seq 513 aa AA seqDB search MFVSASTSRTLPPEIAESVSVMALIERGKADGQIAGDDVRRAFEADQIPATQWKNVLRSL NQILEEEGVTLMVSAAEPKRPRKSVAAKSPAKRTATRTVAAKTVTAKPTATAATEAPTAD DADDAPVKKVAAKKTTAKKAVAKKTTAKKTAAKKTTSKKDADELLDDEATDEAPAAGKPG EGEPAEEGAQGFVLSDEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPLLNAEQEVELAK RIEAGLFAEDKLANADKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGM LFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEV INKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEF GDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKV YGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD NT seq 1542 nt NT seq  +upstreamnt  +downstreamnt ttgttcgtgtcggccagcacatcccgtacgctcccgccggagatcgccgaatccgtctct gtcatggcgctcatcgagcggggaaaggctgatgggcagatcgccggcgatgacgtgcgt cgtgccttcgaagctgaccagattccggccacccagtggaagaacgttctgcgcagcctc aaccagatcctcgaggaagagggtgtgacgctgatggtcagtgccgcggagcccaagcgc ccccgcaagagcgtcgcagcgaagagcccggccaagcgcaccgcgaccaggacggtcgcg gccaagaccgtcacggcgaagcccaccgccaccgccgccactgaggcgccgaccgcggat gacgccgacgacgcgcccgtgaagaaggtcgcagccaagaagacgacggccaagaaggcc gtcgcgaagaagaccaccgccaagaagacggcggccaagaagaccacgtccaagaaggac gccgacgaactcctggacgacgaggcgaccgacgaggcacccgccgccggcaagcccggc gagggcgagccggccgaggaaggcgcccagggcttcgtcctctccgacgaggacgaggac gacgcgccggcccagcaggtcgccgccgccggcgccaccgccgacccggtcaaggactac ctgaagcagatcggcaaggtccccctcctcaacgccgagcaggaggtcgagctcgccaag cgcatcgaggccggcctgttcgccgaggacaagctggccaacgccgacaagctcgccccg aagctcaagcgcgagctggagatcatcgccgaggacggccgccgcgccaagaaccacctc ctggaggccaacctccgcctggtggtctccctggccaagcgctacaccggccgcggcatg ctcttcctggacctgatccaggagggcaacctcggtctgatccgcgcggtcgagaagttc gactacaccaagggctacaagttctccacgtacgccacctggtggatccgtcaggcgatc acccgcgccatggccgaccaggcccgcaccatccgtatcccggtgcacatggtcgaggtc atcaacaagctggcccgtgtccagcgccagatgctccaggacctgggccgcgagcccact ccggaggagttggccaaggaactcgacatgaccccggagaaggtcatcgaggtccagaag tacggccgtgagccgatctccctccacacccctctgggtgaggacggcgacagcgagttc ggtgacctcatcgaggactccgaagcggtcgttccggccgacgcggtcagcttcacgctc ctccaggagcagctgcactccgtcctggacaccctgtccgagcgtgaggcgggcgtggtc tcgatgcgcttcggtctcacggacggccagccgaagaccctcgacgagatcggcaaggtc tacggagtgacgcgtgagcgcatccgtcagatcgagtcgaagacgatgtcgaagctccgt cacccgtcgcgttcgcaggtcctgcgggactacctggactag

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