KEGG   Streptomyces alfalfae: A7J05_10470
Entry
A7J05_10470       CDS       T05110                                 
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
ssia  Streptomyces alfalfae
Brite
KEGG Orthology (KO) [BR:ssia00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ssia03016]
    A7J05_10470
Enzymes [BR:ssia01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     A7J05_10470
Transfer RNA biogenesis [BR:ssia03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    A7J05_10470
 Prokaryotic type
    A7J05_10470
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2 DKCLD
Other DBs
NCBI-ProteinID: APY86069
LinkDB
Position
complement(2647488..2648393)
AA seq 301 aa
MSDSSTTPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVERAT
KLLGHLALTEKEYLGTIRLGQDTVTDDAEGEITSSADASKITRAMIDAGIAKLSGDIMQV
PSKVSAIKIDGKRSYARARKGEDFEIPARPVTVSAFTVYDVRDAVAEDGTPVLDLVVSVV
CSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYKLDAAKTLDKLQEELTVMPVAEAAG
RAFPRWDVDDKRGRLLLNGVRIDMPEEYAGVGAVAVFGPDGRFLVLAEESRGKAKSLAVF
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgagcgacagcagcaccacgccggacggccttgtcatcgtcgacaagccgtccggcttc
acttcgcacgacgtggtggccaagatgcgcgggatcgcgaggacccgccgcgtcggccac
gcgggcaccctcgaccccatggccaccggcgtcctcgtgctcggcgtggagcgcgccacc
aagctcctcggccatctggcgctgaccgagaaggagtatctggggaccatccgcctcggg
caggacacggtcaccgacgacgccgagggcgagatcacctcgtcggcggacgcctcgaag
atcacccgagcgatgatcgacgcgggcatcgccaagctctccggcgacatcatgcaggtg
ccgtcgaaggtcagcgccatcaagatcgacggcaagcggtcctacgcgcgcgcccgcaag
ggcgaggacttcgagatcccggcccgtccggtgacggtctccgccttcacggtgtacgac
gtccgcgacgccgtcgccgaggacggcacccccgtactcgacctggtcgtctcggtggtc
tgctcctcgggcacgtacatccgggccctcgcccgtgacctcggcgcggggctcggcgtc
ggcggccatctgaccgccctgcggcgcacccgcgtcggcccctacaagctcgacgcggcc
aagaccctcgacaagctccaggaggagctgacggtgatgccggtggccgaggccgcgggc
cgcgccttcccgcgctgggacgtggacgacaagcgcggcaggctgctgctcaacggcgtg
cggatcgacatgcccgaggagtacgcgggcgtcggcgccgtcgccgtcttcggacccgac
ggccgcttcctcgtcctcgcggaggagtcgcgcggcaaggccaagagcctcgccgtcttc
gcctga

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