Streptomyces alfalfae: A7J05_12470
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Entry
A7J05_12470 CDS
T05110
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
ssia
Streptomyces alfalfae
Brite
KEGG Orthology (KO) [BR:
ssia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssia03021
]
A7J05_12470
Transcription machinery [BR:
ssia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A7J05_12470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF7343
MarR_2
HTH_24
NirdL-like_HTH
Sigma70_ECF
MarR
IF2_N
HTH_3
HTH_Crp_2
DUF7342
GerE
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
APY86421
LinkDB
All DBs
Position
3115405..3116352
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AA seq
315 aa
AA seq
DB search
MTTGIPEQQAKPHPEDPEQSGPPTVADVSEQAEPTAKDELQQLSGRGGGRRAGNMSEHEH
SRHDPRDRSSARAMFVELRALESSSREYAELRNQLVRMHLPLVEHLARRFRNRGEPLDDL
TQVATIGLIKSVDRFDPERGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRLSLT
TATAELSQMHGRSPTVHELAEKLAISEEEVLEGLESANAYSTLSLDVPDTDDESPAVADT
LGAEDEALEGVEYRESLKPLLEDLPPREKRILLLRFFGNMTQSQIAQEVGISQMHVSRLL
ARTLAQLREKLLVEE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccggaatccccgagcagcaggcgaaaccgcacccggaggacccggagcagtcg
ggtcctccgacggtggccgatgtgtcggagcaggcagagccgaccgccaaggacgagctc
cagcagctctccggccggggcggcgggcgacgggcgggaaacatgagcgagcacgagcac
agccggcacgatccacgggaccggagcagcgcacgcgcgatgttcgtcgagctgcgcgcc
ctggagagcagcagtcgggagtacgcggagctgcgcaaccagctcgtccgcatgcacctg
ccgctcgtcgagcacctggcccgtcgcttccgcaaccgcggcgagccgctcgacgacctc
acccaggtcgccacgatcggcctgatcaagtccgtcgaccggttcgacccggagcgcggc
gtggagttctccacgtacgcgaccccgacggtcgtcggcgagatcaagcggcacttccgc
gacaaggggtgggcggtccgcgtcccgcgccgtctgcaggagctgcgcctgtccctgacg
acggcgacggccgagctgtcccagatgcacggccgctcccccaccgtgcacgagctcgcg
gagaagctggcgatctccgaggaggaggtcctcgagggcctggagtcggcgaacgcctac
tccacgctgtccctggacgtccccgacacggacgacgagtcgccggcggtggcggacacc
ctgggggccgaggacgaggcccttgagggcgtcgagtaccgcgaatcgctcaagccgctc
ctggaggacctgccgccgcgcgagaagcgcatcctgctgctgcgtttcttcgggaacatg
acgcagtcgcagatcgcgcaggaggtcggcatctcccagatgcacgtctcgcgcctgctg
gcccgcaccctggcccagctccgcgagaagctcctcgtggaggagtag
DBGET
integrated database retrieval system
