Streptomyces alfalfae: A7J05_12760
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Entry
A7J05_12760 CDS
T05110
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssia
Streptomyces alfalfae
Pathway
ssia03420
Nucleotide excision repair
ssia03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A7J05_12760
03430 Mismatch repair
A7J05_12760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssia03400
]
A7J05_12760
Enzymes [BR:
ssia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A7J05_12760
DNA repair and recombination proteins [BR:
ssia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A7J05_12760
MMR (mismatch excision repair)
Other MMR factors
A7J05_12760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Zn_ribbon_TiaS
C1_1
Zn_Ribbon_TF
AAA_11
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
APY86472
UniProt:
A0A1P8TFQ3
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Position
complement(3175978..3178311)
Genome browser
AA seq
777 aa
AA seq
DB search
MRLRNGSNVRDPATIPALVRPQPPPCGQPARPPPATWQHEGVTAATHSTLFPQVPDSADA
VLDGLDPEQREVATALHGPVCVLAGAGTGKTRAITHRIAYGVRAGVLQPASVLAVTFTNR
AAGEMRGRLRQLGASGVQARTFHSAALRQLQFFWPKAVGGSLPRIVDRKIKLVADAAAAC
RIRLDRNELRDLTSEIEWCKVTQTVPADYAAAAAKSGRDVPRDPAETAQLYAAYEDLKRD
RAVIDFEDVLLLAVGILQDRHDIAEQVRAQYQHFVVDEYQDVSPLQQRLLELWLGDRDSL
CVVGDASQTIYSFTGATPDHLLNFRTRHPGATVVKLVRDYRSTPQVVHLANGLLSQARGR
AADHRLELISQRDPGAEPVYTEYADEPAEAEGAARRIRALIADGVPAGEIAVLFRTNSQS
EIYEQALADANVPYQLRGAERFFERTEVREAGAALRGAARFGGNDALLDDVVDLPSQVRA
VLSTKGWTSQPPAGSGAVRDRWESLAALVRLAEDFARAKPEATLADLVAELDERANAQHA
PTVEGVTLASLHAAKGLEWDAVFLVGLAEGMMPITYAKTDEQIEEERRLLYVGVTRARVH
LGLSWALSRSPGGRPNRRPSRFLDGLRPGSGGGAAARAAGGGPGGVERGSGAEAPGAVSG
RHRPRSRTPARCRVCGRTLTDAGELKLLRCEDCPSDMDEGLYERLREWRSVQAGRLGQPA
YCVFTDKTLIAIAEAVPEDEGELARIPGVGVRKFHRFGADVLAICAGQDGVRGADGE
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttcgcaatggatcgaacgtacgcgaccccgccaccattcccgcattagtacga
ccgcagccacccccctgtggacaaccggctcgtccgcccccggcgacctggcagcatgaa
ggggtgacagcagcaacgcactccaccctcttcccgcaggtcccggactctgccgacgcg
gtgctcgacgggctcgaccccgagcagcgcgaggtggccaccgccctgcacggaccggtg
tgcgtcctcgccggcgccggtacgggcaagacgcgggcgatcacccaccgcatcgcctac
ggcgtgcgtgccggcgtcctccagcccgccagcgtcctcgccgtcacgttcaccaaccgc
gccgcgggcgagatgcgaggccgcctccgccagctcggcgcctccggcgtccaggccagg
accttccactccgcggccctgcgtcagctccagttcttctggccgaaagcggtcggtggg
tcgctgccccggatcgtcgaccgcaagatcaaactcgtggccgacgcggcggcggcctgc
cgcatccgcctcgaccgcaacgagctgcgtgatctgaccagcgagatcgagtggtgcaag
gtcacccagaccgtccccgcggactacgcggcggccgcggccaagtccggccgcgacgtc
ccgcgcgaccccgccgagaccgcccagctctacgcggcctatgaggacctgaagcgcgac
cgggccgtcatcgacttcgaggacgtgctcctgctcgccgtcggcatcctccaggaccgg
cacgacatcgccgagcaggtccgcgcccagtaccagcacttcgtggtcgacgagtaccag
gacgtgagcccgctccagcagcgcctcctggagctctggctcggcgaccgcgacagcctc
tgcgtcgtcggcgacgccagccagacgatctactccttcaccggagccacccccgaccac
ctgctgaacttccgcacccgccatccgggggcgaccgtcgtcaaactggtcagggactac
cgctccacgccccaggtcgtccacctcgccaacggcctgctctcgcaggcccgcggccgc
gccgccgaccaccggctggaactgatctcccagcgcgaccccggcgcggagcccgtctat
acggagtacgcggacgaaccggccgaggccgagggcgccgcccgccgcatccgggccctg
atcgccgacggcgtccccgccggcgagatcgcggtcctcttccgcacgaactcccagtcc
gagatctacgaacaggccctcgccgacgcgaacgtgccctaccagctgcgcggcgccgag
cggttcttcgagcgcaccgaggtccgcgaggcgggcgcggccctgcgcggcgccgcccgc
ttcggggggaacgacgcactcctggacgacgtggtcgacctgccctcgcaggtgcgggcc
gtgctctccacgaagggctggacctcgcagccgcccgcgggctccggcgcggtccgtgac
cgctgggagtcgctggccgcgctggtccgcctcgccgaggacttcgcgcgggccaagccg
gaggcgaccctcgccgacctcgtggccgaactggacgagcgggcgaacgcccagcacgcc
ccgacggtcgaaggcgtcaccttggcctcgttgcacgcggccaagggcctggagtgggac
gccgtgttcctcgtcggcctcgccgaaggcatgatgccgatcacctacgccaagaccgac
gagcagatcgaggaggagcgccggctcctctatgtgggcgtcacccgtgcccgcgtccac
ctcgggctctcctgggcgctctcccgttcgccgggcggccggcccaaccgccgccccagc
cgtttcctggacggcctgcggccgggctccggcgggggagcggcggcgcgagcggcgggc
ggcggccccggcggcgtggagcgcggcagcggagccgaggcgccgggggcggtatccggc
cgccaccggcccaggagccgcacgcccgcccgctgccgtgtctgcgggcggacgctcacc
gacgcgggcgagctgaagctgctgcggtgcgaggactgcccgtccgacatggacgaaggg
ctgtatgagcggttgcgggagtggcgcagtgtccaggcggggcggctcgggcagcccgcg
tactgcgtcttcacggacaagaccttgatcgccatcgccgaggccgtgcccgaggacgag
ggcgagctggcgcgcatccccggtgtcggcgtgcgcaagttccaccgcttcggcgccgat
gtcctcgccatctgtgcaggtcaggacggtgtaaggggcgccgacggcgagtga
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