Streptomyces alfalfae: A7J05_13500
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Entry
A7J05_13500 CDS
T05110
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ssia
Streptomyces alfalfae
Pathway
ssia03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
A7J05_13500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssia03400
]
A7J05_13500
Enzymes [BR:
ssia01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
A7J05_13500
DNA repair and recombination proteins [BR:
ssia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
A7J05_13500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Ubiq_cyt_C_chap
Motif
Other DBs
NCBI-ProteinID:
APY86598
UniProt:
A0ABM6GTJ5
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All DBs
Position
3356789..3358039
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AA seq
416 aa
AA seq
DB search
MALNTSADAPLPVGQVSRLIGGWIDRLGAVWVEGQITQLSRRPGAGVVFMTLRDPSHDIS
VSVTCYRQVFDAVADVVSEGARVVVHAKPEWYAPRGQLSLRAAEIKPVGVGELLARIEQL
KKRLSGEGLFAPARKQPLPFLPQLIGLITGRASAAERDVLENARHRWPAVRFEVRNVPVQ
GVHAVPQVVQAVKDLDALDEVDVIIVARGGGSVEDLLPFSDEQLVRAVASCRTPVVSAIG
HEPDSPLLDLVADLRASTPTDAAKKVVPDVGEEYERVRWLRDRARRCMDAFLDREDRGLA
HALARPSMEHPHRMVEEREEQVSALVDRSRRTLGHLLDRAGSELTHTHARVVALSPAATL
QRGYAVLQKPDGTVVRAPGDVSADEELRARVAEGEFTVRTVGRADEAAADADDAEI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaacacgtccgccgacgcgccgctgcccgtcgggcaggtgtcgcggctgatc
ggcggctggatcgatcggctcggcgccgtgtgggtcgaggggcagatcacgcagctgtcc
cggaggccgggcgcgggcgtcgtcttcatgacgctccgcgacccctcgcacgacatctcg
gtcagcgtcacctgctaccgccaggtcttcgacgccgtggccgacgtcgtctccgagggc
gcccgcgtcgtcgtccacgcgaagcccgagtggtatgccccgcgggggcagctctccctg
cgggccgccgagataaagccggtcggcgtcggtgagctgctcgcccgcatcgagcagctc
aagaagcgcctctccggagagggtctcttcgccccggcgaggaagcagccgctgcccttc
cttccgcagctcatcggcctgatcacgggccgggcctcggccgccgagcgggatgtcctg
gagaacgcccggcaccgctggcccgccgtccgcttcgaggtgcgcaacgtcccggtgcag
ggcgtgcacgcggtgccgcaggtcgtccaggccgtgaaggacctcgacgccctcgacgag
gtcgacgtgatcatcgtggcgcggggcggcggcagcgtggaggacctgctgccgttctcc
gacgagcagctggtccgcgcggtggcctcctgccgcacaccggtcgtctccgcgatcggc
cacgagccggacagccctcttctggacctcgtggcggacctgcgcgcctccacgcccacc
gacgcggccaagaaggtcgtgccggacgtcggggaggagtacgagcgggtgcgctggctg
cgggaccgcgcccggcgctgcatggacgccttcctcgaccgggaggaccgcggcctcgcc
cacgcgctggcccggccctcgatggagcatccgcaccgcatggtcgaggagcgcgaggag
caggtctccgccctcgtcgaccgcagccgccgcacgctcgggcacctgctcgaccgggcg
ggttcggagctgacgcacacccatgcgcgcgtggtggccctctcccccgcggcgacgctc
cagcgggggtacgcggtgctccagaagccggacggcacggtcgtcagggccccgggcgac
gtgagcgccgacgaggagctgcgggcccgggtggccgagggcgagttcaccgtacgaacc
gtggggcgagccgacgaagccgcggccgacgcggacgatgccgagatttag
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