KEGG   Streptomyces alfalfae: A7J05_14595
Entry
A7J05_14595       CDS       T05110                                 
Name
(GenBank) ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
ssia  Streptomyces alfalfae
Pathway
ssia03420  Nucleotide excision repair
ssia03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ssia00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A7J05_14595
   03430 Mismatch repair
    A7J05_14595
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssia03400]
    A7J05_14595
Enzymes [BR:ssia01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A7J05_14595
DNA repair and recombination proteins [BR:ssia03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A7J05_14595
   MMR (mismatch excision repair)
    Other MMR factors
     A7J05_14595
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 AAA_11 DEAD ResIII DNA_pol3_gamma3
Other DBs
NCBI-ProteinID: APY86793
LinkDB
Position
complement(3596208..3598730)
AA seq 840 aa
MSSLFDDSFLADLQPSRATDEEHPPPPEDSAPEHVPDDLFDGKFDAPMTRDTHYRDGAPR
PVTDPATLLEGLNENQRAAVVHAGSPLLIVAGAGSGKTRVLTHRIAYLLAERGVHPGQIL
AITFTNKAAGEMKERVEQLVGPRANAMWVSTFHSACVRILRREYKKLGFTSSFSIYDAAD
SKRLMALVCRDLDLDPKKFPPKSFSAKISNLKNELIDEEDFAGRAADGFEKTLAQTYAMY
QSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVMVDEYQDTNHAQYALVRELV
GPSGGEGDDPAELCVVGDADQSIYAFRGATIRNILQFEEDYTDATTILLEQNYRSTQTIL
TAANAVIERNESRRPKNLWTNQGAGARITGYVADTEHDEAQFVADEIDRLTDAGDAKAGD
VAIFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANPEDAVPLRR
ILNVPKRGIGDRAEAMIDALSQREKISFPQALRRVDEAYGMAARSTNAVKRFNTLMEELR
TIVESGAGPAVVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEFEQENAQREA
APTADGEAAEGGAGAGEAGTAPTGSLSDFLERVALVADSDQIPDEEDDGSGVITLMTLHT
AKGLEFPVVFLTGMEDGVFPHMRSLGQVKELEEERRLAYVGITRARERLYLTRSSMRSAW
GTPSYNPPSRFLEEIPDTHLDWKRKGSVGAPASSGPAAGIASSLSSSRSRTGGAQGFATR
RASEKPVVSLAVGDRVTHDQFGLGTVVGVKGTGANAEATVDFGEPKPKRLLLRYAPVEKL
NT seq 2523 nt   +upstreamnt  +downstreamnt
atgagcagcctctttgacgacagcttcctggcggacctgcagccctcccgggccacggac
gaagaacacccgcccccgcccgaggacagcgctccggagcacgttccggacgacttgttc
gacgggaagttcgacgcgcccatgacccgggacacgcactaccgggacggtgccccgcgc
ccggtgaccgacccggcgacgctgctcgaaggactgaacgagaaccagcgtgcggccgtc
gtgcacgcgggttccccgctgctcatcgtcgccggcgccggctccggcaagacccgcgtg
ctgacccaccgcatcgcgtatctcctcgccgagcgcggtgtgcaccccggccagatcctc
gcgatcaccttcacgaacaaggccgcgggcgagatgaaggagcgcgtcgagcagctcgtg
ggcccgcgggccaacgcgatgtgggtgtcgacgttccacagcgcctgcgtccgcatcctg
cgccgcgagtacaagaagctgggcttcacgtcctccttctcgatctacgacgccgcggac
tccaagcgcctgatggccctggtctgccgcgacctcgacctcgaccccaagaagttcccg
ccgaagtcgttcagcgccaagatctccaacctcaagaacgagctgatcgacgaggaggac
ttcgcgggccgggccgccgacggcttcgagaagaccctcgcccagacctatgccatgtac
cagtcacgcctgcgcgaggcgaacgcactggacttcgacgacctgatcatgacgacggtc
aacctcctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccgccacgtc
atggtcgacgagtaccaggacacgaaccacgcgcagtacgccctcgtgcgcgagctggtc
ggcccctccgggggcgagggcgacgacccggccgagctgtgcgtggtgggtgacgctgac
cagtcgatctacgccttccgcggcgccaccatccgcaacatcctccagttcgaggaggac
tacaccgacgcgacgacgatcctcctcgaacagaactaccgctcgacgcagacgatcctg
acggcggccaacgcggtcatcgagcggaacgagagccgccgccccaagaacctctggacc
aaccagggcgcgggcgcgcgcatcacgggttatgtggcggacaccgagcacgacgaggcg
cagttcgtcgcagacgagatcgaccgcctcacggacgcgggcgacgcgaaggccggcgac
gtcgcgatcttctaccggacgaacgcgcagtcacgtgtcttcgaggagatcttcatccgc
gtcggcctgccctacaaggtcgtcggcggcgtccgcttctacgagcgcaaggaggtccgc
gatgtgctggcctacctgcgcgttctcgccaaccccgaggacgccgtcccgctgcggcgc
atcctgaacgtgcccaagaggggcatcggcgaccgtgccgaggcgatgatcgacgcgctc
tcgcagcgcgagaagatctccttcccgcaggcgctgcgccgcgtcgacgaggcgtacgga
atggcggcccgctccacgaacgccgtcaagcggttcaacacgctgatggaggagctgcgg
accatcgtcgagtcgggcgcgggcccggcagtcgtcctggaggccgtactcgaacgcacg
ggctatctcgccgagttgcaggcctcgacggacccgcaggacgaaacccgtatcgagaac
ctccaggagctcgccgccgtggcgctggagttcgagcaggagaacgcccagcgggaagcg
gcaccgaccgccgacggtgaggcggcggaaggcggagccggagcaggcgaggcggggaca
gcgccgaccggatcgctctccgacttccttgagcgcgtcgcgctcgtcgccgactcggac
cagattccggatgaggaggacgacggctccggagtcatcaccctgatgacgctccacacc
gccaagggcctggagttcccggtggtgttcctgaccggcatggaggacggcgtcttcccg
cacatgcgctcgctcggccaggtcaaggagctggaggaggagcgccgcctggcatacgtg
ggcatcacgcgcgcgcgggagcggctctacctcacacgctcctcgatgcgcagcgcctgg
ggcacgccctcctacaacccgccgtcgcgcttcctcgaagagattccggatacgcatctg
gactggaagcggaagggctccgtcggcgctccggcgtcgtcaggcccggctgcgggcatc
gcctcgtcgctgtcctcgtcgcgctcgcgcacgggcggcgcgcagggcttcgccacgcgc
cgcgcctcggagaagccggtggtctcgctggccgtcggggaccgggtcacgcacgatcag
ttcggtctcgggaccgtggtcggagtgaagggcacgggggcgaacgcggaggcgacggtg
gacttcggcgagcccaagccgaagcggctcctgctgcggtacgcgccggtcgagaagctg
tga

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