Streptomyces alfalfae: A7J05_18500
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Entry
A7J05_18500 CDS
T05110
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
ssia
Streptomyces alfalfae
Brite
KEGG Orthology (KO) [BR:
ssia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssia03021
]
A7J05_18500
Transcription machinery [BR:
ssia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A7J05_18500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
HTH_Crp_2
HTH_3
Sigma70_ECF
HTH_31
HTH_24
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
APY87456
UniProt:
A0A1P8TIL6
LinkDB
All DBs
Position
complement(4470726..4471589)
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AA seq
287 aa
AA seq
DB search
MSADQGSSKVLTLTLAESPSESAPDALHGSPASEAIDTRTLSRSLFLRLAALDQDSPERV
YVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMP
TVVGEIKRFFRDTSWSVRVPRRLQELRLALTKTSDELAQRLDRSPTVPELALALGVSEED
VVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRLGYEDSALEGVEYRESLKPLLAKLPPR
ERRIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLRDGLISD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaccagggcagctcgaaggtgctcacgctcacgctcgccgagagcccgagc
gaatccgcgcccgacgcgcttcacggctcaccggcctcggaggccatcgacacccggacc
ctgtcccgctccctgttcctgcggctcgccgcgctcgaccaggacagcccggagcgcgtc
tacgtacgcgacacgctcatcgagctcaacctcccgctcgtgcggtacgcggcggcgcgc
ttccgcagccgcaacgaaccgatggaggacatcgtccaggtcggaacgatcggcctgatc
aaggcgatcgaccgtttcgactgcgaacgcggcgtggagttcccgacgttcgcgatgccg
acggtcgtcggggagatcaagcgcttcttccgggacaccagttggtcggtgcgcgtcccg
cgccgcctccaggagctgcggctcgcgctcaccaagaccagcgacgagctggcccagcgg
ctcgaccgctcgccgaccgtgcccgaactcgccctcgcgctcggggtgtccgaggaggac
gtggtcgacgggctcgcggtgggcaacgcctacaccgcctcctcgctcgactccccggcc
cccgaggacgacggcggcgagggctccctcgcggaccgcctggggtacgaggactcggcc
ctggagggcgtggagtaccgcgagtccctcaagccgctgctcgccaagctgccgccgcgc
gagcgccggatcatcatgctgcgcttcttcgccaacatgacgcagtcgcagatcggcgag
gaggtcggcatctcccagatgcacgtctcgcggctcctcacgaggacgctggcccagctg
cgcgacggcctgatctcggactga
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