Streptomyces alfalfae: A7J05_19785
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Entry
A7J05_19785 CDS
T05110
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ssia
Streptomyces alfalfae
Pathway
ssia03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssia00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A7J05_19785
09124 Replication and repair
03420 Nucleotide excision repair
A7J05_19785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssia03021
]
A7J05_19785
03400 DNA repair and recombination proteins [BR:
ssia03400
]
A7J05_19785
Enzymes [BR:
ssia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A7J05_19785
Transcription machinery [BR:
ssia03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
A7J05_19785
DNA repair and recombination proteins [BR:
ssia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
A7J05_19785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
APY87657
UniProt:
A0A1P8TJ42
LinkDB
All DBs
Position
4738599..4740242
Genome browser
AA seq
547 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHEQAEACRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVEFSRYPVPHALLVDVAETMARYGRLTLSKHPVHGLVLTTTDRPVLEEILR
SKKVQPLVGARLDPDTVAVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHKIDLDEAGWS
LRPYQQQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMAQAKATTLILVTNTVSARQWKHEL
VKRTSLTEDEIGEYSGTRKEIRPVTIATYQVLTTRRKGIYPHLELFDSRDWGLVIYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDGERLAYATAEAEEKYRFCATTATKRKVTEALVRKHAGEQTLVIGQYIDQ
LDELGEHLGAPVIKGETTNAQREKLFDAFRQGEISVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHEARFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDA
DELLAGG
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggacccctcatcgtccagtcggacaagactctcctgctggaagtggaccacgag
caggccgaagcgtgccgccgggccatcgcgccgttcgccgaactggagcgcgcccccgag
cacatccacacgtaccgggtgacgccgctcggcctgtggaacgcccgggccgccgggcac
gacgccgagcaggtcgtcgacgccctcgtggagttctcccgctaccccgtgccgcacgcg
ctgctcgtcgacgtggccgagaccatggcgcggtacggccgcctcaccctctccaagcac
cccgtccacggcctcgtgctcaccacgaccgaccggccggtgctcgaagagatcctgcgg
tccaagaaggtccagccgctcgtcggcgcgcggctcgacccggacacggtcgccgtgcac
ccctccgagcgcggccagatcaagcagacgctgctgaagctgggctggcccgccgaggac
ctggcggggtacgtggacggtgaggcgcacaagatcgacctggacgaggcgggctggtcc
ctgcggccctaccagcagcaggccgtcgaggggttctggcacggcggcagcggtgtcgtc
gtgctgccctgcggggcgggcaagacgctggtcggcgccggggccatggcgcaggccaag
gcgaccaccctcatcctcgtcaccaacaccgtctccgcccgccagtggaagcacgagctg
gtgaagcggacctcgctgaccgaggacgagatcggcgagtacagcgggacccgcaaggag
atccggccggtcaccatcgccacgtaccaggtgctgacgaccaggcggaagggcatctac
ccgcacctcgaactcttcgactcgcgggactggggcctcgtcatctacgacgaggtgcac
ctgctgcccgcgcccgtcttcaagttcaccgccgatctccaggcgcggcgccgcctcggc
ctgaccgcgaccctggtgcgcgaggacgggcgcgagtcggacgtcttctcgctgatcggg
cccaagcggttcgacgccccgtggaaggagatcgaggcgcagggctacatcgcgcccgcc
gactgcgtggaggtgcgggtcaacctcaccgacggcgagcggctcgcgtacgccaccgcg
gaggcggaggagaagtaccgcttctgcgccaccaccgccaccaagcggaaggtgacggag
gcgctggtcaggaagcacgcgggggagcagacgctcgtcatcgggcagtacatcgaccag
ctcgacgagctgggtgagcacctgggcgcgcccgtcatcaagggcgagacgacgaacgcg
cagcgcgagaagctcttcgacgccttccggcagggggagatctccgttctcgtcgtgtcc
aaggtcgccaacttctccatcgacctgccggaggccaccgtcgccatccaggtgtccggc
acgttcgggtcgcggcaggaggaggcgcagcggctcgggcgcgtcctgcggcccaaggcc
gacgggcacgaggcccgcttctactccgtcgtggcgcgggacaccatcgaccaggacttc
gccgcgcaccgccagcggttcctggccgagcaggggtacgcctaccggatcgtcgacgcg
gacgaactgctcgccggcggctga
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