Streptomyces alfalfae: A7J05_19885
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Entry
A7J05_19885 CDS
T05110
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ssia
Streptomyces alfalfae
Brite
KEGG Orthology (KO) [BR:
ssia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssia03016
]
A7J05_19885
Enzymes [BR:
ssia01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
A7J05_19885
Transfer RNA biogenesis [BR:
ssia03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
A7J05_19885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
APY87673
UniProt:
A0A1P8TJ63
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All DBs
Position
4761199..4761810
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AA seq
203 aa
AA seq
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MRLFVAVVPPDAVAAELASAVASLRELPGSGALRWTARESWHFTLAFLGEVDEAAVPGLT
ARLGRAAHRTPPFSLALRGGGHFGDRALWVGAAGGAPELRLLARRTEAAARKAGLAVEEH
RAYRPHLTLARGRGGTELGPYADALDAFRGAPWTVRELTLVRSELPRSGVPGERPRYEVL
GRRPLGGGAASPGGGSREPGGAG
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgagactcttcgtcgcggtcgttccgccggatgccgtggccgccgaactggcctccgcc
gtcgcctcgttgcgcgagctgccgggctccggggcgctgcggtggacggcccgggagagc
tggcacttcacgctggcgttcctgggggaggtggacgaggcggccgtccccggcctcacc
gctcgcctcggacgggccgcgcaccgtacgccgcccttctccctggccctgcgcggcggc
gggcacttcggcgaccgcgcgctgtgggtgggcgcggcagggggcgcgcccgagctgcgg
ctcctcgcccggcgcacggaggcggcggcgcgcaaggcgggcctcgcggtggaggagcac
cgggcctaccgcccgcacctgacgctggcgcgcggccgcggcgggacggagctcggcccg
tacgcggacgcgctcgacgccttccggggcgccccctggaccgtacgggagctgacgctg
gtccgcagcgagctgccgaggagcggggtgccgggggagcggccccggtacgaggtgctg
gggcgccggccgctcgggggcggggccgcctcgccgggaggcggctcccgggagccgggc
ggggccggttaa
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