Streptomyces alfalfae: A7J05_23520
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Entry
A7J05_23520 CDS
T05110
Name
(GenBank) helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ssia
Streptomyces alfalfae
Pathway
ssia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A7J05_23520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssia03400
]
A7J05_23520
Enzymes [BR:
ssia01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A7J05_23520
DNA repair and recombination proteins [BR:
ssia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A7J05_23520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
NAT10_TcmA_helicase
PIF1
NPHP3_N
TraI_hel_assoc_N
AAA_16
PhoH
DEAD
nSTAND3
HTH_IclR
AAA
UvrD-helicase
SLFN-g3_helicase
ATPase_2
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
APY88262
UniProt:
A0A1P8TKT4
LinkDB
All DBs
Position
5572914..5575151
Genome browser
AA seq
745 aa
AA seq
DB search
MSSPAAAAAVLEGVLERITYANEETGYTVARVDTGRGGGDLLTVVGSLLGAQVGESLRMQ
GRWGSHPQYGKQFTVENYTTVLPATIQGIRRYLGSGLIKGIGPVMADRITTHFGVDTLDV
IETEPKRLVEVPGLGPKRTRMIAAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYGDAS
ISVVRNEPYRLAADVWGIGFLTADRIAQAVGIPHDSPDRVKAGLQYALSQSTDQGNCYLP
EERLIADAVKLLQVDTGLVIDCLADLAREEEGVVRETLPAPDGGDDVTAVYLVPFHRAEL
SLAAQLLRLLKTPDDRMPAFRDVDWDRALAWLAKRTGAQLAPEQQEAVRLALTRKVAVLT
GGPGCGKSFTVRSVVELARAKKAKVVLAAPTGRAAKRLAELTGAEASTVHRLLELRPGGD
AAYDKERPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVDQLPSVGAGEVLRD
MLADGSPVPAVRLTRIFRQAQESGVVTNAHRINSGVPPLTQGLKDFFLFVEEETEDAGRV
TVDVAAHRIPRKFGLDPRRDVQVLAPMHRGPAGAGALNGLLQQAVTPARPGLPEKRFGGR
VFRVGDKVTQIRNNYEKGRNGVFNGTVGVVTALDPDEQRLTVLTDEDEEVPYDFDELDEL
AHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKRLVVLVGSRKALGQAV
RTVSAGRRCTALDFRLAGRRFPAQG
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtccagcagcggccgccgcggtgctagagggggtcctcgaacgcatcacgtat
gccaacgaggagacgggttacaccgtggcgcgcgtcgacaccgggcgcggcgggggagac
ctgctgaccgtcgtcggctcgctgctcggcgcgcaggtcggcgaatccctgcggatgcag
ggccgctggggctcccacccgcagtacggcaagcagttcaccgtggagaactacacgacg
gtgctgcccgccaccatccagggcatccgccgctatctgggctccgggctcatcaagggc
atcggccccgtcatggccgaccgcatcaccacccacttcggcgtcgacaccctcgacgtc
atcgagaccgagccgaagcggctcgtggaggtgccgggcctcggccccaagcggaccagg
atgatcgccgccgcctgggaggagcagaaggccatcaaggaggtcatggtcttcctccag
ggagtgggcgtctccacctccatcgccgtgcggatctacaagaagtacggcgacgcctcc
atctccgtggtgaggaacgagccgtaccgcctcgcggccgacgtctggggcatcggcttc
ctgaccgccgaccgcatcgcccaggcggtcggcatcccgcacgacagtcccgaccgcgtc
aaggcgggccttcagtacgccctttcgcaatcgaccgaccagggcaactgctacctcccg
gaggagcgcctcatcgccgacgcggtgaagctcctccaggtcgacaccggcctcgtcatc
gactgcctggccgatctcgcgcgggaagaggagggcgtcgtgcgcgagacgctcccggcc
ccggacggcggcgacgacgtcaccgccgtctatctcgtccccttccaccgcgccgaactc
tccctcgccgcccagctcctgcggctgctcaagacgccggacgaccgcatgcccgccttc
cgcgacgtcgactgggacagggctctggcgtggctcgcgaagcgcacgggcgcccagctc
gcccccgagcagcaggaggccgtgcggctcgcgctgacgcggaaggtggccgtcctgacc
ggcgggcccggctgcggcaagtccttcacggtccgttccgtcgtcgagctggcccgcgcc
aagaaggccaaggtcgtcctcgccgcccccaccggacgcgccgccaagcgcctcgccgag
ctgacgggcgcggaggcctccaccgtgcaccgcctgctggaactgcggcccgggggagac
gcggcgtatgacaaggagcgtccgctcgacgccgatctggtcgtggtcgacgaggcctcg
atgctcgatctgctcctcgccaacaagctggtcaaggccgtgccgcccggcgcgcacctg
ctcttcgtgggcgacgtcgaccagctcccgagcgtcggcgccggcgaggtcctgcgggac
atgctcgccgacggcagccccgtgcccgccgtccggctgacccggatcttccgccaggcg
caggagtccggcgtcgtcaccaacgcccaccgcatcaactccggggtgccgccgctcacc
cagggcctgaaggacttcttcctcttcgtcgaggaggagaccgaggacgcgggccgcgtc
acggtggacgtcgccgcgcaccgcatcccgcgcaagttcggcctcgacccccgcagggac
gtccaggtcctcgcgcccatgcaccggggccccgcgggcgcgggcgccctcaacggcctc
ctccagcaggccgtcacgcccgcccgccccggcctgcccgagaagcggttcggcggccgg
gtcttccgcgtcggcgacaaggtcacccagatccgcaacaactacgagaaggggcgcaac
ggcgtcttcaacggcacggtgggcgtcgtcaccgccctcgacccggacgagcagcggctc
accgtcctgaccgacgaggatgaggaggttccgtacgacttcgacgagctggacgagctg
gcgcacgcttacgcggtcacgatccaccgctcccagggcagcgagtatccggcggtggtg
atccccgtcaccacgggcgcgtggatgatgctccagcgcaatctgctctacaccgcggtg
acacgcgcgaaaaggctggtcgtcctcgtcggatcgcgcaaggctcttggacaggccgtg
cgcacggtctctgcgggcaggcgctgcacggccctggatttccggctcgcgggccgccgg
ttcccggctcagggatga
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