Streptomyces alfalfae: A7J05_26325
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Entry
A7J05_26325 CDS
T05110
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ssia
Streptomyces alfalfae
Pathway
ssia03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A7J05_26325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssia03400
]
A7J05_26325
Enzymes [BR:
ssia01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
A7J05_26325
DNA repair and recombination proteins [BR:
ssia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
A7J05_26325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
APY88737
UniProt:
A0A1P8TM48
LinkDB
All DBs
Position
complement(6235349..6236233)
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AA seq
294 aa
AA seq
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MSSDQSPRAVSRNPVGGHVPVAGGLASVGLSYAREIGAEAVQVFVANPRGWATPVGNPQQ
DEAFREACAAEGIPAYVHAPYLINFGSHTEATVEKSVDSLRHSLRRARAIGALGVVVHTG
SATGGRDRAVALAQVRERMLPLLDELTHDDDPFLLLESTAGQGASLCSRTWDFGPYFEAL
DAHPKLGVCLDTCHIFAAGHDLTGPSGMKQTLDLLVDTVGEGRLKLVHANDSKDVAGAHK
DRHENIGTGHIGEEPFRELMLHPATEGVPLVIETPGGKEGHAADVARLQGLRTL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagtgaccagtccccccgtgccgtgtcccgcaaccccgtcgggggccatgtcccc
gtggccggaggtctggcctccgtggggctctcgtacgcccgtgagatcggcgcggaggcc
gtccaggtgttcgtcgccaatccgcgcggctgggcgacgccggtcggcaacccgcagcag
gacgaggcgttccgcgaggcctgcgccgccgagggcatccccgcgtacgtgcacgcgccc
tacctgatcaacttcggctcgcacaccgaggcgaccgtggagaagtccgtggactccctg
cgccactcgctgcggcgggcccgcgccatcggggcgctcggcgtggtcgtgcacaccggc
tcggcgaccggcggcagggaccgcgcggtcgccctcgcgcaggtgcgcgagcgcatgctg
ccgctgctcgacgagctgacgcacgacgacgacccgttcctgctcctggagtcgaccgcg
ggccagggcgcctcgctctgctcccgcacctgggacttcggcccctacttcgaggcgctc
gacgcccatccgaagctgggcgtctgcctggacacgtgccacatattcgccgcgggccac
gacctgacggggccgagcggcatgaagcagaccctcgacctcctcgtggacacggtcggc
gagggccgcctgaagctcgtgcacgccaacgactccaaggacgtcgcgggcgcccacaag
gaccgccacgagaacatcggcaccggccacatcggcgaggagcccttccgcgagctcatg
ctccaccccgccacggagggcgtgcccctggtcatcgagacgcccgggggcaaggagggg
cacgcggcggacgtggcgcggctccaggggctcaggaccctgtag
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