Streptomyces alfalfae: A7J05_30815
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Entry
A7J05_30815 CDS
T05110
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
ssia
Streptomyces alfalfae
Brite
KEGG Orthology (KO) [BR:
ssia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssia03021
]
A7J05_30815
Transcription machinery [BR:
ssia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A7J05_30815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
KORA
MarR_2
HTH_3
HTH_37
HTH_31
MarR
HTH_24
HTH_Tnp_4
DUF134
IF2_N
Motif
Other DBs
NCBI-ProteinID:
APY91241
LinkDB
All DBs
Position
complement(7223038..7223856)
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AA seq
272 aa
AA seq
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MPEVAELPEIADPQAVSPKDARALSQLFFDQLAVLEEGTHEYQYVRNTLIELNMSLVRYA
AGRFRNRSDEMEDVVQVGMIGLIKAIDRFELSREVQFATFAVPYIVGEIKRFFRDTSWAV
HVPRRLQEARVELAKATEELSSRLGRSPTVDELAALMNLTPEEVIEARLASNGYNSASLD
AALSGDSTDETPLADFIGAVDPSLELVEDFHALAPLIAELPERDREILRLRFAEELTQSQ
IGERLGVSQMQVSRLLSRTLGSLREGMLTTTD
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaggtcgcggagctgccggagatcgcggacccgcaggcggtgtcgccgaaggac
gcccgcgccctgtcccagttgttcttcgaccagctcgccgtgctggaggaggggacgcac
gagtaccagtacgtgcgcaacacgctcatcgaactgaacatgtccctggtccgttacgcc
gccgggcggttccgcaaccgcagcgacgagatggaggacgtggtccaggtcggcatgatc
ggcctcatcaaggccatcgaccgtttcgagctctcccgcgaggtccagttcgccacgttc
gcggtcccctacatcgtcggtgagatcaagcgcttcttccgtgacacgtcctgggccgtg
cacgtgccccgccgcctccaggaggcccgggtcgaactcgccaaggccaccgaggagctg
agcagccgcctcggccgctcccccacggtcgacgagctggccgccctgatgaacctgacg
cccgaagaggtcatcgaggcgcgcctggcctccaacgggtacaactccgcctccctcgac
gcggccctgagcggcgactccaccgacgagacgccgctggccgacttcatcggcgcggtc
gacccctccctggagctcgtggaggacttccacgcgctcgcgcccctcatcgcggagctg
cccgagcgtgaccgggagatcctgcgtctgcgcttcgcggaggagttgacgcagtcccag
atcggcgagcgcctcggcgtctcccagatgcaggtgtcccggctgctctcccggaccctg
gggagcctgcgcgagggcatgctcaccaccaccgactga
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