Streptomyces alfalfae: A7J05_32285
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Entry
A7J05_32285 CDS
T05110
Name
(GenBank) pectate lyase
KO
K01051
pectinesterase [EC:
3.1.1.11
]
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ssia
Streptomyces alfalfae
Pathway
ssia00040
Pentose and glucuronate interconversions
ssia01100
Metabolic pathways
ssia02020
Two-component system
ssia02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssia00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
A7J05_32285
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A7J05_32285
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A7J05_32285
Enzymes [BR:
ssia01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
A7J05_32285
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
A7J05_32285
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Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
APY89747
UniProt:
A0ABM6H1T1
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All DBs
Position
7558012..7560075
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AA seq
687 aa
AA seq
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MTELHGPGRARHRRKKTALVAGVPLALTAAAAMAYGTAFGVFGADAQPKAAAAPAPAWAD
DTADGFASVEAHGQKGTYGGRGGRTVTVRTLADLEKYATAAEPYVIVVAAAIPVDPKGKE
IKVASDKTIVGAGASGEIVGGGFFLGRGVHNVIIRNLTIRDSYAGVWNDKEHDFDAIQMD
GAHHVWIDHNDLRHMADGLIDSRKDTTNVTVSWNRLSRNNKTFGIGWSENTTADLTVHHN
WFRETEQRNPSTDNVAHAHLYNNYLQDDPGTDITSSYGNYARGRTKMVLENSYFKGVDNP
VIKDATAALVQRGNVFSGTSGRNESGGTAFDPKRYYRYTPDRAADLPGILKAGAGPREDI
GTTNGTQAVRATTLTVAKDGSGQYRSVQRAVDAVPAGNTAPVVIRIAPGTYRETVKVPSN
KPHVTLQGTGGSRKDTLIVEGHASGMTKPGGGTYGTGGSATVAVEADDFTARNLSLANDF
DEARNQQLDGQQAVALRTAADRVRLDDLIVSGDQDTLLLDTAAKDRTGRVYLTDSYVIGN
TDFVFGRATAVVDRSVLTLKKRWNGTSAGYVTAPSTPAGRKGFLITRSTIDGDVSAGSFH
LGRPWHAGGDASLDPQTTVRDSTLGAPIKKTPWTDMGGFSWKDDRFAEYKNKGPGAGGPS
ADRPHLSDAQAADFETADWLGGWKPAD
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgactgagctgcacggccccggcagagcacggcaccgccggaagaagacggccctggtg
gcaggtgttccgctggcgctgaccgccgcggcggccatggcctacggcacggccttcggg
gtgttcggcgcggacgcgcagccgaaggccgcggcggcccccgccccggcctgggccgac
gacaccgcggacggtttcgcgtcggtcgaggcccacggccagaagggcacctacggcggc
cggggcgggcggacggtgaccgtccggaccctcgccgacctggagaagtacgcgaccgcc
gccgagccctacgtcattgtggtggccgcggcgatcccggtggaccccaagggcaaggag
atcaaggtcgcgtccgacaagacgatcgtgggcgcgggcgcctcgggcgagatcgtcggc
ggcggcttcttcctcggccggggcgtgcacaacgtgatcatccggaacctcacgatccgg
gactcgtacgcgggcgtctggaacgacaaggagcacgacttcgacgccatccagatggac
ggcgcccaccacgtgtggatcgaccacaacgacctgcggcacatggccgacggcctgata
gacagccgcaaggacaccaccaacgtgacggtgtcctggaacaggctgtcccgcaacaac
aagaccttcggcatcggctggagcgagaacaccaccgccgacctcaccgtgcaccacaac
tggttccgcgagaccgagcagcgcaacccctccacggacaatgtcgcgcacgcgcacctc
tacaacaactacctccaggacgacccgggcacggacatcacctcgtcctacgggaactac
gcgcgcggcaggacgaagatggtcctggagaacagctacttcaagggcgtcgacaacccc
gtcatcaaggacgccacggcggccctcgtgcagcgcggcaacgtcttctccggcaccagc
gggcgcaacgagagcggcggcacggccttcgacccgaagcggtactaccgctacaccccg
gacagggccgccgacctccccggcatcctcaaggccggcgccgggccgcgcgaggacatc
gggacgacgaacggcacccaggccgtacgggccaccaccttgacggtggccaaggacggc
agcgggcagtaccgcagcgtccagcgggccgtcgacgccgtgcccgcgggcaacaccgcg
cccgtcgtcatccggatcgcgcccggcacctaccgcgagacggtcaaggtcccgtcgaac
aagccgcacgtcacgctgcagggcacgggcggcagccgcaaggacacgctcatcgtcgag
ggccacgcctccgggatgaccaagccgggcggcggcacctacggcaccggcggcagcgcg
accgtcgccgtggaggccgacgacttcacggcccgcaacctctccctcgccaacgacttc
gacgaggccaggaaccagcagctcgacggccagcaggcggtggccctgcgcaccgccgcc
gaccgggtgcgcctggacgacctcatcgtcagcggcgaccaggacacgctgctgctcgac
accgctgccaaggaccgcacgggccgggtctacctgaccgactcgtacgtgatcggcaac
accgacttcgtcttcggccgggccacggcggtcgtcgaccggtccgtcctcaccctgaag
aagcgctggaacggcacgtcggccgggtacgtcaccgcgccgagcacccccgcgggacgc
aagggcttcctcatcacccgctcgaccatcgacggcgacgtgtccgccgggagcttccac
ctcgggcgcccctggcacgcgggcggtgacgcgagcctcgacccgcagaccaccgtccgc
gactccaccctcggcgccccgatcaagaagaccccctggacggacatgggcggcttctcc
tggaaggacgaccgcttcgccgagtacaagaacaagggaccgggcgcgggcggccccagc
gccgaccgcccgcacctgagcgacgcccaggccgcggactttgagaccgcggactggctc
ggcggctggaagcccgccgactga
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