Sporomusa silvacetica: SPSIL_000870
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Entry
SPSIL_000870 CDS
T10425
Symbol
dacB_1
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacB
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ssid Sporomusa silvacetica
Pathway
ssid00550
Peptidoglycan biosynthesis
ssid01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SPSIL_000870 (dacB_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssid01002
]
SPSIL_000870 (dacB_1)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssid01011
]
SPSIL_000870 (dacB_1)
Enzymes [BR:
ssid01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SPSIL_000870 (dacB_1)
Peptidases and inhibitors [BR:
ssid01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
SPSIL_000870 (dacB_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
ssid01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SPSIL_000870 (dacB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Peptidase_S13
Transpeptidase
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
XFO63998
UniProt:
A0ABZ3IF15
LinkDB
All DBs
Position
complement(104026..105183)
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AA seq
385 aa
AA seq
DB search
MARRLLRSATFLVVFWWLTTSMVCSAPPVMSAQGAILMDAKTGQVLYDRNMNKKLAPAST
TKIMTAIIAIESGRLDETTRVSAHAAATGGSSLNLYPGQSITLRELVTGLLLRSGNDAAV
AIAEHLAGSVDAFVEIMNKKALSIGAIHTQFRNPHGLSAPNHLSTAFDLASIARYALLNP
TFSQIVSTKETNIEWLDRKGQNHNRNLRNTNKLLWMLADADGVKTGTTNMAGPCLVSSAT
RDNQRLIAVVLHDHARWYDSMQLLKYGFEQYDLYEYAEDGAVFSALPIENGLTDMVDALV
AGPGSLVVTATDYPAVTVEVDLPEKIKAPVYQGQKIGEIVFYVQDKAVKTVDLVAGSTVE
EYTINKILLRHWLSTIQRLSGWGLL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaggttactacgctctgccaccttcctggtagttttttggtggctaaccacc
agtatggtttgttccgcaccaccggtaatgtccgctcaaggggctattttaatggatgca
aaaactggacaagtgctttatgaccgcaacatgaataaaaaactggcaccagccagcacg
accaaaatcatgaccgccatcattgccatcgaaagtggtcgtttggatgaaaccacgcgt
gtaagtgcccatgctgccgccactggcggctcctcactgaatctgtatccagggcaaagt
attacgctgcgtgaactggttaccggccttctgcttcgctccggtaatgatgctgctgtt
gctattgccgagcacctagcaggctcggttgacgcttttgtcgaaattatgaataaaaag
gccctcagcattggcgccatacatacccaatttcgcaacccccacgggttaagcgccccc
aatcatctgtcaacagcttttgatttggcctcaatagcccggtatgccttacttaatccc
acgttttcccaaatcgtcagtacaaaggagaccaacattgaatggcttgaccgcaaaggc
caaaatcataaccgtaatctccgcaataccaataaactactctggatgctagcagatgct
gacggtgtaaaaaccggtacaaccaatatggctggcccctgtttggtttcgagcgctacc
cgcgataatcaaaggctcattgccgttgtcctgcatgatcacgcccgctggtatgactca
atgcaactattaaaatatgggtttgagcagtatgatttgtacgaatacgccgaagacggc
gctgttttctccgcactgccgatagaaaatggtttgacagacatggtagatgccctggta
gcggggcccggatcactggtagttactgcgaccgactatccagctgtaactgtagaagtg
gacttacccgaaaaaattaaggccccggtataccagggccaaaaaatcggcgaaatcgta
ttttatgttcaggataaagccgtaaaaacagttgatcttgttgccggcagcacggtagaa
gaatacaccataaataaaatcctgctccggcattggcttagcactatccaacggttatct
ggctggggactgctatag
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