Sporomusa silvacetica: SPSIL_001390
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Entry
SPSIL_001390 CDS
T10425
Symbol
ldc
Name
(GenBank) Lysine/ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ssid Sporomusa silvacetica
Pathway
ssid00330
Arginine and proline metabolism
ssid00480
Glutathione metabolism
ssid01100
Metabolic pathways
ssid01110
Biosynthesis of secondary metabolites
ssid04148
Efferocytosis
Module
ssid_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SPSIL_001390 (ldc)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SPSIL_001390 (ldc)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SPSIL_001390 (ldc)
Enzymes [BR:
ssid01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
SPSIL_001390 (ldc)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Germane
Motif
Other DBs
NCBI-ProteinID:
XFO64050
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Position
171434..172597
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AA seq
387 aa
AA seq
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MKYFRLSQDAVKALADTYSTPLLVLSLEQIELNYKLLAENMPDVKIYYAVKANPDERIIR
KLDTLGGYFDVASDGEMRMLNQLGIDSDRMVYANPVKTNSGLKVAHDVGVHKFTFDSESE
IEKIATAIPGGTALLRIRVDNPHALVDLNKKFGVHPDEALALLTKARVAGLDVAGLCFHV
GSQSTSSEAYLAALKSCRKLFDAAKGLGMHLHILDIGGGFPIPTLTEEPDVAQMAAAIYK
VIRQYFPDTEIWAEPGRYICGTAVNLITQVIGTKVRNNQQWYFLDDGLYGTFSGVIFDHW
DFELETFKTGKMIPATFAGPSCDSLDIMFRDKHTVPMEIGDLILVPNCGAYTSASATVFN
GFAKTQIVVWEEVYKAIQAKLELATAG
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatattttaggttatcccaggacgctgtcaaggcactggctgatacctacagcact
cccttgttggtgctgtctttagaacaaattgaattaaattacaagctactggctgaaaat
atgccagatgttaaaatatattacgccgtcaaggccaatccggatgaacgaattatccgg
aagcttgacacgcttggtggttatttcgacgtcgcgtctgacggggagatgcgtatgttg
aatcagttaggtattgactctgaccgcatggtgtatgctaatccggtgaaaacaaacagc
ggcttaaaagtagcgcatgatgttggggtgcataaatttacttttgacagtgaaagcgaa
attgaaaaaatagcaacagctattcccggtggcactgctttgctgcgcatccgggtggac
aacccgcatgcattggttgatcttaataaaaaatttggtgttcatccggatgaggcgctg
gcgcttttgaccaaagcgagggtggccggacttgatgtggctgggttgtgcttccatgtg
ggcagccagtcaacaagtagtgaagcctaccttgctgcgctcaaaagttgccgtaaactt
tttgatgcggctaaagggttaggcatgcaccttcatattcttgacatcggtggtggtttt
cctattcctacattgaccgaagagcctgatgtggcgcaaatggcagccgctatttataaa
gttattagacaatatttccctgatactgagatttgggcggagccagggcggtatatctgt
ggtacggcggttaatctgattacccaggttatcggcaccaaagtgcgcaataaccagcaa
tggtactttctggatgatggattgtatgggactttttcaggcgttatctttgatcactgg
gattttgaactggagacctttaagactggtaaaatgattccggccacctttgctggtcca
agctgtgattcgctggacattatgtttcgggataaacatactgtgccgatggagattggc
gacttgattctggtacctaactgcggggcttatacgtcggcttcggcaacagtattcaat
ggctttgccaaaacgcaaattgttgtgtgggaagaagtatataaagcaattcaggccaag
cttgagttagctactgcggggtaa
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