Sporomusa silvacetica: SPSIL_004540
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Entry
SPSIL_004540 CDS
T10425
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ssid Sporomusa silvacetica
Pathway
ssid03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SPSIL_004540 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssid03021
]
SPSIL_004540 (rpoA)
03400 DNA repair and recombination proteins [BR:
ssid03400
]
SPSIL_004540 (rpoA)
Enzymes [BR:
ssid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SPSIL_004540 (rpoA)
Transcription machinery [BR:
ssid03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SPSIL_004540 (rpoA)
DNA repair and recombination proteins [BR:
ssid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SPSIL_004540 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
XFO64352
LinkDB
All DBs
Position
472546..473505
Genome browser
AA seq
319 aa
AA seq
DB search
MIEIEKPKIEIVEISEDSRYGKFVWEPLDRGFGITLGNSLRRVLLSSLPGGAVTSVKIDG
VLHEFATIPGVREDVTDIILNLKELCLKMHSDEPKVLLVEAFEEGEVTAGDIKADADIDI
LNPELHLATVGAGGQLRMEIMIEKGKGYIPADKNKKPDHVIGIIPIDSIFSPIVRVNYNV
TDTRVGNVTNYDKLTLEVWTDGSMRPEEAVSKAAGIMVSHLKLFQNIAGEPPEEDEDQDL
VSEEPAEGKNRTMEMTIEDLDLSVRSYNCLKRAGINTVAELVQKSEDDMMKVRNLGRKSL
EEVKKKIIEMGLALAEQEE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaatcgaaaaaccgaagatcgaaatagtagaaataagtgaagacagccgttat
ggcaaatttgtatgggaaccgctcgacaggggctttggcattacgctgggcaacagtcta
cggcgggtgctcttatcatctttaccaggtggagctgtaacctcagtgaaaattgatggt
gtgcttcatgaattcgctacgattcccggtgttcgggaggacgtcaccgacattatacta
aacctaaaagaactgtgtcttaaaatgcatagtgacgagcctaaagttttgcttgttgaa
gcgtttgaagaaggcgaagtcacagcaggcgatattaaggccgatgccgacattgatatt
ttaaacccggaactgcacttggcgacagtaggtgctggtggtcagctccggatggaaatc
atgatagaaaaaggcaaagggtatataccggctgacaaaaacaaaaaacccgaccatgta
atcgggattattcctattgactccatcttctcacctattgtacgcgtcaattataacgtt
actgatacgcgtgttggtaacgtaactaattatgacaaactgacattagaagtatggact
gacggcagtatgcgtcctgaagaagcggttagcaaagctgctggaattatggtgtcgcac
ctgaaattgtttcaaaatattgccggagaacctccagaagaagatgaggatcaggattta
gtttctgaagaacctgcagagggtaaaaacaggacaatggaaatgaccattgaagacctg
gatctctcagtacgttcttacaactgtttgaaacgggccggaatcaacacagtggctgag
cttgtgcaaaagagcgaagatgatatgatgaaagttcgcaatttgggacgcaagtcactg
gaagaagttaagaaaaaaattattgaaatgggtctggcactcgcagaacaagaagagtaa
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