Sporomusa silvacetica: SPSIL_015700
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Entry
SPSIL_015700 CDS
T10425
Symbol
ftsH_6
Name
(GenBank) ATP-dependent zinc metalloprotease FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ssid Sporomusa silvacetica
Pathway
ssid04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SPSIL_015700 (ftsH_6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssid03019
]
SPSIL_015700 (ftsH_6)
03009 Ribosome biogenesis [BR:
ssid03009
]
SPSIL_015700 (ftsH_6)
04131 Membrane trafficking [BR:
ssid04131
]
SPSIL_015700 (ftsH_6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssid04147
]
SPSIL_015700 (ftsH_6)
Messenger RNA biogenesis [BR:
ssid03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SPSIL_015700 (ftsH_6)
Ribosome biogenesis [BR:
ssid03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
SPSIL_015700 (ftsH_6)
Membrane trafficking [BR:
ssid04131
]
SNARE
SNARE associated proteins
Others
SPSIL_015700 (ftsH_6)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
SPSIL_015700 (ftsH_6)
Exosome [BR:
ssid04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SPSIL_015700 (ftsH_6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
AAA_5
AAA_22
AAA_2
RuvB_N
AAA_14
AAA_33
AAA_lid_PRS2_C
AAA_7
CDC48_2
TIP49
Sigma54_activat
nSTAND3
RNA_helicase
AAA_24
AAA_28
AAA_18
AAA_30
Mg_chelatase
AAA_19
DUF815
AAA_3
ATPase
Sigma54_activ_2
Zeta_toxin
IstB_IS21
SLFN-g3_helicase
bpMoxR
Parvo_NS1
Viral_helicase1
Vps4_C
Motif
Other DBs
NCBI-ProteinID:
XFO65445
LinkDB
All DBs
Position
1591790..1593904
Genome browser
AA seq
704 aa
AA seq
DB search
MEKAISFRVADAMPEDVGQGYIRIDNADMEKMEVIIGDILEIQGRKTTVAKVVPCFSQYK
NQNIAQMESIIRENAGVGIDERVTVRKIARQPAQTLVLSPLDVTIDFSDAQDSKHLERVL
NGLPMIIGDRLKVNLAGARSQYFTVIGTAPQGAVIVNAATEIKVTKTDASEDRSFRASYE
DVGGLDKELQRIREMVELPLKYPEIFRQLGVEAPKGVLLYGPPGTGKTLMARAVSSETNA
AFLHVNGPEIINKFYGESEARIREIFETAQRRAPAIIFIDEIDAIAPKRTEVIGDVEKRV
VAQLLALMDGLKNRGQVVVIGATNVPDMVDPALRRPGRFDRELSINPPDRFGRLKILKIH
TRLMTIDSSVNIEKLAQMTHGFVGADIAILCKEAGMNAVRRLLPEIDFSEELREEDLAKL
TINMNDFFAAFREVEPTATREFFSERPNTKWEQVGGMADIKRNLQAMIEMPLQHLELFKE
MQHNMPKGFLLTGRPGTGKTLMVKALAGSSEAHFISVDAATLNSRWFGEAEKGLRRIFKR
AKQIAPCILFFDEIDALAPVRAVTDKNGTDRLVSQLLLELDSLMDSANVIVVAATNRPDM
VDPALMRPGRFDYIVELPLPNKAERLEIFKIHTAKMPLADGIDLDELIISTEGAVGSDIE
AICKHAALSAMKRYVSDSQSIATHIYKVLNEDFGYGLRQISLKK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagccatatcctttagagttgccgatgctatgccggaagatgttggtcaagga
tatatccggattgataacgccgacatggaaaaaatggaagttattataggtgatattctc
gagattcaagggagaaaaacgacagttgccaaagtagttccctgttttagtcaatacaaa
aatcaaaatattgcgcaaatggaatctataatcagagaaaatgccggagtcggaatagac
gaacgggtaacggtaagaaaaattgcgcgtcaaccagcacaaacgttagttttgagtcca
ttggatgtaacaatagattttagcgatgcccaagatagtaagcatttagaacgagtctta
aatggactgccaatgattatcggtgataggcttaaggttaatctggccggagcgagaagt
cagtactttactgttatcggtacagcaccgcaaggggctgtgatcgttaacgcagctact
gaaataaaagtgactaaaacggatgcttcggaagatcgcagttttcgagcttcctatgaa
gatgtaggtggtcttgacaaagaactccaacgtattcgtgaaatggttgaattgccgctt
aagtaccctgaaatttttcgacagctaggggttgaagcacctaaaggagtcctgctctat
ggcccgccgggtacaggtaaaaccctgatggctagagctgtatccagtgaaactaatgca
gcatttttgcacgtgaatggtccagaaatcatcaataagttctatggagaaagtgaagcc
cggattagagagatatttgagacagcgcaaagacgggcaccggccattatctttattgat
gagattgatgccatcgctcctaaacgaactgaagtaatcggcgatgttgaaaaacgtgtt
gttgcccagctattagctttgatggatggtctgaagaatcgagggcaagtagttgttatc
ggtgctactaacgtacccgatatggtcgatccggcgcttcgccggccaggaagatttgac
cgggagctatccattaatccgcccgacagattcggaagattaaaaatattaaaaatacat
actcgtttaatgacaattgattcttcggtaaacatagaaaaacttgcccaaatgacgcat
ggttttgttggcgcagatatagccattctctgtaaggaagccgggatgaacgctgtgcgg
cggctactgccagagattgatttctcggaagaacttagggaagaagacctagcaaagctg
acaatcaacatgaacgattttttcgctgcattccgggaagtagagccaactgctaccagg
gaatttttttcggaacggcccaataccaagtgggaacaagttgggggaatggctgatata
aaaagaaatttgcaggccatgattgaaatgccgctacagcacctcgaattgtttaaggaa
atgcagcacaacatgccgaaaggatttttgctaacagggcggccaggaacaggtaaaacg
ctaatggtaaaagcactggctggttcgagtgaagctcatttcatatcggtagatgccgct
acgcttaattcccgctggttcggcgaagccgaaaagggtctgcgacgtatttttaagcga
gccaagcaaatcgctccctgcattctgttttttgatgaaattgatgcattagcgcctgtg
cgggcggtaacagataaaaatggaacagatcgcttagtaagtcaactgcttttggaacta
gatagtttaatggatagtgccaatgtaattgttgttgctgccaccaaccggcctgatatg
gtagacccggcacttatgcggccaggacggtttgattatattgtggaactaccattacct
aacaaagcagaacgattagaaatatttaagattcataccgcaaaaatgcctttagcagat
ggtattgatctggatgaactgataatttctacagagggcgcggtgggttctgatattgag
gccatctgcaagcacgcagctttatcagcgatgaaacgctatgttagtgattcgcagagt
atagctactcacatctataaggtgttaaatgaggattttggctatggtctgcgtcaaata
tctctaaaaaagtaa
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