Sporomusa silvacetica: SPSIL_015870
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Entry
SPSIL_015870 CDS
T10425
Symbol
lcfB_2
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ssid Sporomusa silvacetica
Pathway
ssid00061
Fatty acid biosynthesis
ssid00071
Fatty acid degradation
ssid01100
Metabolic pathways
ssid01212
Fatty acid metabolism
ssid02024
Quorum sensing
ssid04146
Peroxisome
Module
ssid_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SPSIL_015870 (lcfB_2)
00071 Fatty acid degradation
SPSIL_015870 (lcfB_2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SPSIL_015870 (lcfB_2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPSIL_015870 (lcfB_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ssid01004
]
SPSIL_015870 (lcfB_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssid04147
]
SPSIL_015870 (lcfB_2)
Enzymes [BR:
ssid01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SPSIL_015870 (lcfB_2)
Lipid biosynthesis proteins [BR:
ssid01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SPSIL_015870 (lcfB_2)
Exosome [BR:
ssid04147
]
Exosomal proteins
Exosomal proteins of breast milk
SPSIL_015870 (lcfB_2)
Exosomal proteins of breast cancer cells
SPSIL_015870 (lcfB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
XFO65462
UniProt:
A0ABZ3IIE7
LinkDB
All DBs
Position
1606941..1608425
Genome browser
AA seq
494 aa
AA seq
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MQLLFVHDLILKGTVDSPAFAGKDKVSYGELQEQVRKYRNYFYSLGIRTGENVGLFSHNS
VEFVYCYMAIVSLGAIVVPINFQLTVRETTFIVKDAKMSHLITRERLAIDSELKQQGYTQ
EVTQLVIADIKLVVEQEAFSTAPALAAGFDENQSCVIIYTSGTTGIPKGAVLSHKNLVSD
AVAFRGMLPVAATDNVLCVLPMYHCFSWTCAVLVSLLCGASITILEAFAPKETIAAIKDY
KVTVVYGVPPMYNFFVRVGQGQDFSGVRHFISGGASLPEKIAQQFSDKYGQKIIEGYGLS
EASPVVALNPVLKPKYCSIGKALPGVEVRVADPNGQTLPPGMVGELVVRGPIVMKGYFNL
PAETATTLKDGWLYTGDLAYQDSEGYFFVVDRLKDLIISNGENIYPREIEELLYAYPGII
EASVIGVADELRGQVARAFIVLAEGQRFDKKAVREYLHANIAAYKIPRDFQVVDALPKNQ
TGKILKRVLREHVG
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
gtgcagttattgtttgttcatgatcttatccttaaaggaacagtagacagcccggctttt
gccggtaaagataaggtgtcttatggtgaattgcaagagcaagtaaggaaataccgcaat
tatttttattcattaggcattcggacaggtgaaaatgtaggattattttcccacaattcg
gttgagttcgtatactgctatatggctattgtcagtctgggagctatcgttgtccccatt
aattttcaattaactgtcagagaaactactttcattgttaaagacgctaagatgagccat
ctcattaccagggagcgtttagcaattgattctgagcttaagcaacaaggctatacgcag
gaagttacccagcttgttatagctgacattaaattagtagtagaacaggaggcattttca
acggctccggcgctagcagccggttttgacgaaaatcagtcttgcgttattatatatact
tcaggtacaactggtattcccaaaggggctgtgttatcccacaaaaatctggtcagtgat
gcagtggctttccggggaatgctgccggtggctgctacagataatgtattatgtgtgctt
ccaatgtatcactgcttttcctggacgtgcgctgtgcttgtctctctgctttgcggggcg
tcaattacaatattggaagcttttgcgcccaaagaaactattgcggcgattaaagactat
aaagtaacagttgtctacggagtgcctcctatgtataatttttttgttcgtgttgggcag
ggccaagacttctccggtgttagacactttatctccggtggagcgtctttgcctgaaaaa
atagcgcagcaattttcagacaaatatggccaaaagattattgaaggctatggtctttca
gaagcttcgccggtagtagcacttaacccagtgttgaagccaaaatactgctcaattggc
aaagctctccctggcgtagaggtaagggtggctgatcccaacgggcagactttgccgcca
gggatggttggtgagcttgtcgtgcgtgggccaattgtcatgaaggggtattttaatcta
ccagctgaaacggctaccacgcttaaagatggctggctttatacgggcgatttagcctat
caagattcggaaggctatttctttgttgtcgatcgcttgaaggatttgattatttccaat
ggggaaaatatttatccgcgcgagattgaggagttgctttatgcgtacccaggtattatt
gaggccagtgttattggtgtcgctgacgagctgcgcggccaggtagcgcgtgcttttatc
gtgctggctgaaggtcagcgttttgataagaaggcagtaagagagtatcttcatgccaat
attgccgcttataaaattccgcgtgatttccaggtggtggatgctttgcccaaaaatcag
acaggcaaaattttaaaacgtgtgctgcgcgaacacgtggggtaa
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