Sporomusa silvacetica: SPSIL_022960
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Entry
SPSIL_022960 CDS
T10425
Symbol
codY_2
Name
(GenBank) GTP-sensing transcriptional pleiotropic repressor CodY
KO
K03706
transcriptional pleiotropic repressor
Organism
ssid Sporomusa silvacetica
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssid03000
]
SPSIL_022960 (codY_2)
Transcription factors [BR:
ssid03000
]
Prokaryotic type
Helix-turn-helix
Other families
SPSIL_022960 (codY_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CodY
HTH_CodY
HTH_Crp_2
MarR_2
Rrf2
HTH_11
HTH_24
MarR
TrmB
GntR
Ribosomal_S25
DnaD_N
HTH_5
HTH_41
HTH_20
Sec20
HTH_29
DUF6167
DUF7343
Motif
Other DBs
NCBI-ProteinID:
XFO66146
UniProt:
A0ABZ3IKD0
LinkDB
All DBs
Position
2306780..2307553
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AA seq
257 aa
AA seq
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MSLLERTRTINKLLQKSEKVEYSEVSTVLSNVMAANVYIVNKDGSILGYALLDDFECDLM
RDIVLKTGQFPERYVAWLRKIEQTSPNLRLEGGLCSFSAETNCLFNDKFTTIVPIHGVGE
RIGTLIVAKFSVEFVDDDLILAEYGGTVVGMEMLRDRSEKIEEEARKKATVQVALGTLSY
SELEAVMHILSELEGNEGLLVASKIADRVGITRSVIVNALRKFESAGVIESKSLGMKGTY
IKVLNERLLEELQKLKK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtcattattagaacgtacacgtactattaataaattgctccagaaatcagaaaaagta
gaatatagcgaagtttcgacagtgcttagcaatgttatggcggctaatgtctatattgtt
aacaaagatggtagtattttgggatatgcattacttgatgattttgagtgtgatcttatg
cgggatatagtgcttaaaacgggacagtttcctgaacggtatgtagcatggttgcgcaag
attgagcagacatcccccaaccttcgtttggaaggcggattatgtagttttagtgcagaa
accaattgcttatttaacgataaatttactaccattgttcctatccatggcgtaggggaa
cgtataggaacattaattgtagctaaatttagtgttgaatttgttgatgatgatttaata
ttggctgaatatggtggaacagttgttggcatggaaatgcttagagaccgcagtgaaaaa
attgaggaagaagctagaaaaaaggctactgtgcaagtagcgctgggaacattatcttat
tcagaattagaagcagttatgcatatattaagcgaactagaaggcaatgaaggattgttg
gttgccagtaaaattgctgaccgcgttggtatcactcgctctgtaatagtcaatgcgtta
cgtaagtttgaaagtgcaggtgtgattgaatccaaatcacttggcatgaaaggaacatat
ataaaagttcttaacgaacgattattagaagaattgcaaaaactaaaaaaataa
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