Sporomusa silvacetica: SPSIL_023560
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Entry
SPSIL_023560 CDS
T10425
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ssid Sporomusa silvacetica
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssid03016
]
SPSIL_023560 (truB)
Enzymes [BR:
ssid01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SPSIL_023560 (truB)
Transfer RNA biogenesis [BR:
ssid03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SPSIL_023560 (truB)
Prokaryotic type
SPSIL_023560 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DKCLD
SAWADEE
Motif
Other DBs
NCBI-ProteinID:
XFO66206
LinkDB
All DBs
Position
2362091..2362972
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AA seq
293 aa
AA seq
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MQSGIINVLKPPGMTSHDVVSYIRRLYSIKRVGHAGTLDPAAAGVLPVFIGNATRLVEYL
ADADKSYRAELTFGFETDTGDDTGKITNSRPYIRPKLSEIKDALASFIGVNEQIPPMYSA
VKIGGKKLYELARQGQVVERKPRKILIDTISLITECETGIVFDVTCSKGTYIRVLCSDIG
CRLNCLAVMSFLVRTRVGNFHLEQALTLEEIAANKEQAIQTADSVLTHLPAIVLSEQESQ
AIKNGRSICCNQSGSDLIKMYDMYNTFIGIGRETCQLGGHVTLTPVKILSPGL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcgggataattaatgtacttaaaccgccgggcatgacatcacatgatgtcgtg
tcgtatatccggcggctatatagcatcaagcgtgttgggcatgcgggtacattggatcct
gcagcagcaggcgtattacccgtatttattggaaatgcaactaggcttgttgaataccta
gccgacgcagataaaagctatcgggctgagcttacttttggctttgaaacagatactggt
gatgataccggaaaaatcacgaatagtcgcccgtatattcggcccaagttgagcgagatt
aaggatgcacttgcttcttttattggtgtcaatgaacaaattccgccgatgtattctgct
gtaaaaattggtggtaaaaagttgtatgaactggccaggcaaggtcaggttgttgagcga
aaaccgcgtaaaattctaatcgatacgatctcgcttataaccgaatgcgaaaccggtatt
gtatttgatgtaacctgttctaaaggaacctatattagggtcttgtgttctgatattggt
tgcaggctaaattgcttagcagtaatgagttttctagtcaggacaagagtaggaaatttt
catttagagcaagctttaactcttgaggaaattgccgctaataaagaacaagctattcaa
actgcggatagtgttttgacccatctgccagcgatcgtgttgtcagaacaagaatcccag
gctataaaaaatgggcgtagtatctgctgcaatcaaagcggttctgatttaataaaaatg
tatgatatgtataacacattcattggtattggtcgagaaacatgtcaactgggcgggcat
gtaacactaactcccgtgaaaatattaagtccgggcctgtga
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