Sporomusa silvacetica: SPSIL_024130
Help
Entry
SPSIL_024130 CDS
T10425
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ssid Sporomusa silvacetica
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssid03009
]
SPSIL_024130 (rimO)
Enzymes [BR:
ssid01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SPSIL_024130 (rimO)
Ribosome biogenesis [BR:
ssid03009
]
Prokaryotic type
ribosomal protein modification factors
SPSIL_024130 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
XFO66263
LinkDB
All DBs
Position
2428184..2429512
Genome browser
AA seq
442 aa
AA seq
DB search
MLTAGFISLGCAKNLVDTEIMLGILADNNIHITDNPQDAELLIINTCGFIDSAKEESIST
IMQMAEYKQNGKCRGVIVAGCLGQRYQQELLDELPEISAIVGTGAWHRIMEAVTAVLANE
RVLLIGETDTLYDETMRRITTTPAYSAYVKIAEGCSNCCSYCVIPLVRGKFRSRPVESIV
NEVKKLTERGVKEINLIAQDTTSYGRDRYGKPQLMNLLSELVKIEGVFWIRLLYCYPKYF
NEELIELIANEPKICNYIDLPLQHADDEILSGMNRQDTRSDIENLLKRIRTVIPGVTIRT
SFIVGFPGETDKHFESLKNFMLEQKFERVGVFTYSQEEDTPAGIMENQVPDSVKEERFHE
LMSLQCRVSEELNHDMEGKMLTVLIEGHNQDQPSVAFGRSYREAPDVDGCIYVENAIGLL
PGELVQAEVVQGFTYDLVAEKK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcttacagcaggatttattagtttaggatgtgccaaaaacctcgtagataccgagata
atgttaggcattttagcggataataatatacacattaccgataatccccaggatgctgaa
ctattaattattaatacctgcgggttcatagattctgctaaagaggaatctatctcaacc
attatgcagatggctgagtataaacaaaatggtaagtgtcggggtgttattgttgctggc
tgtttaggccagcgctatcagcaggaattattagacgaattaccggaaatatccgccatt
gttggtacaggcgcatggcatcgaattatggaagctgttactgcggtactagcgaatgaa
cgtgtgttgcttattggtgaaacagacacgttgtatgatgaaactatgcggcgaattacc
actactccagcatatagtgcttatgtaaagattgcggaaggatgcagcaactgctgttcc
tattgtgtaattccgctggtacgaggcaaatttcgaagtcgcccagtagaatcaattgta
aatgaagtgaaaaaacttactgagcggggagtaaaagaaatcaatcttatagcccaggat
actacaagttatgggcgtgaccgttacggtaagcctcaattaatgaatctgcttagcgaa
ctggttaaaattgaaggtgttttttggattagattgctatattgctatcctaaatatttc
aacgaagaacttattgaacttattgctaatgaaccgaagatttgcaactacattgatttg
ccactacaacatgctgatgacgaaatactgtcggggatgaatcgccaagacacacgatct
gatattgagaacttactgaagagaattcgcactgttattcccggagtgaccattcgtact
tcgtttattgttggttttccaggtgagactgataaacattttgagtcattgaagaacttc
atgctggagcaaaagtttgagcgagtaggtgtatttacctattcccaagaagaggatacg
cctgctggaattatggaaaatcaagtacctgatagtgtcaaagaggaacgcttccacgaa
ctaatgtctttacaatgccgcgtttctgaagagttgaaccatgatatggaggggaaaatg
ctgacagtattaattgagggacataaccaggatcaaccgagtgtagcattcggcagatct
taccgggaagcacctgatgttgatggctgtatttatgtcgaaaatgctatcggtttgttg
ccaggagaacttgtacaggcagaagttgtacagggcttcacctatgatttagtggccgaa
aaaaagtaa
DBGET
integrated database retrieval system
