Sporomusa silvacetica: SPSIL_025240
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Entry
SPSIL_025240 CDS
T10425
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ssid Sporomusa silvacetica
Pathway
ssid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SPSIL_025240 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssid03400
]
SPSIL_025240 (priA)
Enzymes [BR:
ssid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPSIL_025240 (priA)
DNA repair and recombination proteins [BR:
ssid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SPSIL_025240 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
SLFN-g3_helicase
PIF1
MarR
AAA_16
TrwB_AAD_bind
AAA_19
Zn_ribbon_6
DUF1272
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
XFO66374
LinkDB
All DBs
Position
2544504..2546924
Genome browser
AA seq
806 aa
AA seq
DB search
MSNTAQIIVNIPTRSITKPFSYLIPAHLSFADIGWRVLVPFGNRKVEGFIVGLEAESIPG
LKSILDVLDDYPWFDNNMLETAKWLSNYYLCSLAEAMRLFIPGQSGIKTQKAYQVPLTLD
WEYTKALLRDKPEEYHTILTYIYEHGPVTLTDLAKRFTSIEGMIKFCIQHKLIVTADTVS
KRGKANSTMLIKLAVSKEVAAQIEATLPKSKTAQRRLLQALLPTQELTAVQLRSLAITQA
TVKKLAEQGLIIICSVPVFRNSYAGAQPKAAELTLTTEQLQALEQIIPAINDSIYKSFLI
HGVTGSGKTQVYINAVAEARRLDRQAIVLVPEIALTSQIVARFRAAFGDDVVVMHSKLSV
GERYDAWRRLHAGQAGIVIGARSALFAPVSQLGLIIIDEEHEFTYKQEETPRYHAREVAS
ARAKLAGATVLLGSATPAIETYYQALQGEHKLLPMNKRVDDIPMPAVTIVDMRQELAQGR
RSVISLPLQTMLTEILAKKEQAIILLNRRGYSTFVLCRECGHVLKCNHCDISLVYHAPTS
ILRCHYCQERHAVPDVCPECGSRYIRYFGAGTQKVEEALEGLFPLARIVRMDQDTTRGKL
AHDKILAAFAAGSYDILLGTQMVAKGHDIPNVTAVGIISADTALNLPDFRAAEKTFALLT
QAAGRAGRGSKPGRVVMQTYNPEHYAITAGAEHNYQEFYQQELGFRQQLGYPPYANLIKV
TVQANDETIVHRQANQLAAELSQSLAMAGTAIIGPFPAAVNKVKDIFRVNILIKTKDLPT
ITKQISMMSMVNQKNIIIDIDPINVL
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataccgcccagataattgtaaatattcctactcgcagcattactaagcctttt
tcctatcttattcccgcccacttgtcatttgctgatataggttggcgcgtgctggtgcca
tttggtaatagaaaggtagagggatttattgtcggtttagaggctgaaagcatccccggt
ttaaaatccattcttgatgttctagatgactatccttggtttgataacaacatgttagaa
actgccaaatggctaagtaactattacctatgctctttggctgaagctatgcggttattt
attccagggcaatcaggcatcaaaactcaaaaagcatatcaagtaccgcttacgcttgat
tgggagtataccaaagctttactacgtgataaaccagaagaatatcatacaatactcacc
tacatctatgagcacggtccggtcacattgaccgaccttgctaaaagattcaccagtatt
gagggcatgataaaattctgcatacagcacaagctaatcgtaactgctgatacggtcagt
aagcgtggcaaggctaactcaacaatgcttattaagctggccgtaagcaaggaagtcgct
gctcaaattgaagcaacgctgcctaaatctaaaactgcccaacggcgtttgctccaggcg
ctattacctacgcaagaacttactgcagttcagcttcgcagtctggctattacccaagct
actgtgaaaaaactagctgaacaaggtcttattattatctgcagcgtgccggtatttcgt
aatagctatgctggagctcagcccaaagctgctgaattgaccttgaccacagagcagtta
caggctttagagcaaattattccagcgataaatgacagtatttataaatcctttttaatt
catggtgttaccggtagtggtaaaacgcaggtttatatcaatgcagtagctgaagcgcgg
cgtcttgaccgtcaagctatagtcttggtaccggaaatagctttaacaagccagattgtc
gctcgtttccgagcggcctttggtgatgacgtagtcgttatgcatagcaagctttcagta
ggtgaacggtatgatgcctggcggcgactacatgcaggacaggccggcattgtcattggc
gcccgatcagcattgtttgcgccagttagtcagttaggccttattatcattgatgaagaa
cacgagtttacctataagcaggaggaaacaccccgttatcacgcccgagaggtggcgtca
gccagagctaaacttgctggagctactgtactacttggcagtgcgacacctgctattgaa
acctattaccaggcattgcagggagagcacaaattgctgcctatgaataaacgggtggac
gatataccgatgccagcagttacgattgtcgatatgaggcaagaactggcacaaggtcgc
cgtagtgtcatttcactacctttgcagaccatgttaaccgaaatcttagccaagaaagaa
caggctattattctgcttaaccgtcgcggctactcaacatttgtcctgtgccgtgagtgt
ggtcatgtccttaaatgtaaccactgcgacatctcacttgtctaccatgctcccactagt
atcttgcgctgccattattgtcaagaacgccatgcagtaccagacgtttgtcctgaatgc
ggcagtcggtacatccgttattttggtgctggcacccagaaggtggaagaagcgctggaa
gggttattcccattagccagaattgtacgtatggatcaagatactacccgtggaaagctg
gcccatgacaagattctcgctgcttttgctgccggttcgtatgacattctcctaggtaca
caaatggtggctaaaggtcatgatattcccaatgtaacggcagttggtattatttcagca
gatacagcgctcaacttgcctgactttcgcgcagcagaaaaaacctttgcactcctgacg
caagccgcggggagagccggacgtggcagtaaaccaggacgagtagtcatgcagacatat
aatccagagcactatgcgattactgccggtgcagagcataattatcaggaattttatcaa
caagaactgggttttcgccagcaattaggttacccgccctatgcgaatctgataaaagta
acggtacaagctaatgacgaaaccatagttcaccgccaggctaaccaattagcagcagaa
ctttcgcagtcattggctatggcaggcactgccattattggaccgtttccagctgcggta
aataaagttaaggatatcttccgggtgaatattctcattaaaactaaagatttgcctaca
ataactaaacaaattagcatgatgagtatggttaatcaaaaaaatattattatcgatatt
gaccccattaatgttctttag
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