Sporomusa silvacetica: SPSIL_025650
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Entry
SPSIL_025650 CDS
T10425
Symbol
pbpF
Name
(GenBank) Penicillin-binding protein 1F
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
ssid Sporomusa silvacetica
Pathway
ssid00550
Peptidoglycan biosynthesis
ssid01100
Metabolic pathways
ssid01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SPSIL_025650 (pbpF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SPSIL_025650 (pbpF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssid01003
]
SPSIL_025650 (pbpF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssid01011
]
SPSIL_025650 (pbpF)
Enzymes [BR:
ssid01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
SPSIL_025650 (pbpF)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SPSIL_025650 (pbpF)
Glycosyltransferases [BR:
ssid01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
SPSIL_025650 (pbpF)
Peptidoglycan biosynthesis and degradation proteins [BR:
ssid01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
SPSIL_025650 (pbpF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
GDH2_N
Motif
Other DBs
NCBI-ProteinID:
XFO66415
LinkDB
All DBs
Position
2583382..2585370
Genome browser
AA seq
662 aa
AA seq
DB search
MKKNSIRVTIMALLFAMSVNTCFAFLGLPGVDSLNDLNLVAATQVFDINGQLISKLFEEN
RIVVNINSMSPYIQQAIIANEDTRFYNHFGIDPIGIIRAVVVNIRRGGLVEGGSTITQQL
AKNMFLTQERTFIRKVKEAALALVIDYKFSKQEILQAYLNQVYFGEGTYGVEAAAQMYFG
KHANELALSESAMLAGLPRGPSIYSPYADMKAATERRAVVLDSMVKEGYITQQEAVRAKV
EPVKLAGKKKRVVQASYFLDYVAKELVDRYGANRVYKGGLKVYTTLDISQQQAAEAVLGQ
MQGAVLALDSKTGYVKAMVGGRNYEESQINRVFAEVRQPGSAFKPFLYATAINQGLTANA
IIIDEPININGYSPLNYDKKNRGPITMKKALRWSVNVAAVKLGQQIGIDQVLNLAKTMGI
TTLTPEDNNLASALGGLTQGVNLWELTTAYTAFANNGVLSKPIAIVKVLDENGQVLEEGR
IEQQSVLKPETAYILTDMLRGVVQDGTATPANLGRPAAGKTGTTDNYETAWFIGYTPDIV
VGIYVGNDNRKPVSISGTEVSALWGKMLSKIVANTPPTDFPIPPNVVVGIPVCTSTGKLA
GSGCKETEYSAFIKGTEPTAPRVNNRIKQWLTPDETQPQSPEQQEQKKQPFWKWPWSRLP
SF
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaacagcattagagttactatcatggctctcctatttgcaatgtcggttaat
acgtgttttgcttttctaggattgccgggtgttgacagtttaaacgatttaaatctagta
gctgctactcaagtatttgatataaacgggcagctgatttctaagttgtttgaggaaaac
cggatagtagtaaatattaatagcatgtcaccttatattcagcaagccattatagccaat
gaagacactcgcttctataatcattttggcatagatccgattggtattattcgtgctgtc
gtggtcaatatccgccggggcggtctggtggaaggcggtagtactataacccagcagttg
gcaaaaaatatgtttcttacacaggagcgaacgtttattcgcaaggtaaaagaggcggca
ctagcgttagttattgattacaaattttcgaagcaagagatcttgcaagcatacttaaat
caggtatattttggcgaagggacttatggtgtagaggctgccgctcaaatgtactttggc
aaacatgctaacgagttagctttatctgaaagtgctatgctggcaggactaccgcgcggg
cctagtatctattcgccttatgctgatatgaaggcagctacggaacgccgggcagtagtg
ctggacagtatggttaaagagggctatatcacgcagcaagaagcagtacgcgccaaagtt
gagccggttaagcttgctggtaaaaaaaagcgagtagtgcaagcttcttactttcttgac
tatgtagctaaggaattagttgaccgctatggtgcaaaccgggtatataaaggtggactc
aaggtgtatacaacgcttgacattagtcagcaacaagcagctgaggcggtgttagggcaa
atgcagggagcagtattagcacttgactccaagacagggtatgttaaagctatggttggt
gggcgtaactatgaagaaagtcagatcaaccgggtgtttgctgaagttcgccaaccgggg
tcggcttttaaaccatttttatatgcaactgcgattaatcaaggactcactgctaacgct
attatcatcgatgaacctattaatataaatggctattcgccacttaactatgataaaaaa
aaccgtgggccaataactatgaaaaaagcgctgcgctggtcagtcaatgtagctgccgtc
aagctagggcagcagatcggcattgaccaagttctaaaccttgcgaaaactatgggcatc
accactttgacacccgaagataataatctggcctcggcattaggcggcttaactcagggg
gtcaatttatgggagttaacgacagcttatacagcctttgctaataacggcgtattatct
aaaccgatagcaatcgtaaaggtacttgatgaaaatggtcaggtgcttgaggaaggaaga
atagagcaacagtcggtgcttaagcccgaaacggcctacattttaacagatatgcttaga
ggcgtagtgcaggatggtactgctacaccagctaaccttggccgtcccgctgctggcaaa
acaggcactacagataactatgagacagcctggtttatcggttatactccagacattgta
gttggtatttatgtagggaatgacaatcgcaagcctgttagcatttctggtacggaagtg
tcagcattatggggaaaaatgctttctaaaatagtagctaatacaccgcctactgatttt
cccatcccgcctaatgtagttgttggtatccctgtttgtacaagcacaggcaagctggct
ggaagtggctgcaaagaaacggagtacagcgcctttatcaaaggtactgagccaacagct
ccgcgagtgaacaaccgtattaaacaatggttaactcctgacgaaactcagccgcaatcg
cctgaacagcaggaacaaaaaaagcagcctttctggaaatggccctggtcgagattgccg
tcattttaa
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