Sporomusa silvacetica: SPSIL_028770
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Entry
SPSIL_028770 CDS
T10425
Symbol
ispH
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
ssid Sporomusa silvacetica
Pathway
ssid00900
Terpenoid backbone biosynthesis
ssid01100
Metabolic pathways
ssid01110
Biosynthesis of secondary metabolites
ssid03010
Ribosome
Module
ssid_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SPSIL_028770 (ispH)
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SPSIL_028770 (ispH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ssid03011
]
SPSIL_028770 (ispH)
Enzymes [BR:
ssid01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
SPSIL_028770 (ispH)
Ribosome [BR:
ssid03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SPSIL_028770 (ispH)
Bacteria
SPSIL_028770 (ispH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
PilZN
S1_2
OB_RRP5_4th
DUF2110
Motif
Other DBs
NCBI-ProteinID:
XFO66718
LinkDB
All DBs
Position
2878268..2880229
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AA seq
653 aa
AA seq
DB search
MKIFLAEHRGFCYGVKRAVDMAISSLDLNCPVHTLGPIIHNPQMISHLNELGISTVDKLE
EIIAGKVIIRSHGVGPDIYDQAESKQLQVVDATCPHVKKAQQAAHNLLLAGYKVVIVGEP
HHPEVQSILAWTNQAASVVETLAEAEALPYYSRLGVVAQTTFAADRFQAIVTILQAKCQE
LKIERTICTATDLRQQAAINLAQKVDIMIVVGGKNSANTARLASVCQDTGKAAYHIESAN
ELQPEWFTGVQTAGITAGASTPDWVIKEVYEKMEALNMTDITKVENGSIIEGTVVGVRHD
EVFVDIGYKAEGVIPLSELAYPAPQTATEIVSVGQVIEVLVLDADSADGQVKLSKIQADR
ITAWDKLEQALTDKLPLETKITEVVKGGLVSSVFGIRGFIPASHVDLRFVEDLQPFVGQT
VQVIPIEIDREKQKAVLSRKQLLAQERAVKEKELFATLAVGQNITGKVSRLTNFGAFVDV
GGIDGLIHISDLSWQRVKTPQEVVNVGDEVTVVVLKVDPEAKKLALSLKDLERDPWYATV
ETLAVGTVLTGTVSKLAKFGAFVELKKGIEGLVHISEMAERRVASPEEVVSAGQQVAVKI
LAIDKENKRIALSIVQAEQDKERAEFSDYLSTQAPSSGVTLGDKFGHLFKRED
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaattttcttggctgaacaccggggtttttgttatggcgtcaaacgagctgtcgat
atggctatcagctcgcttgacttaaactgtccggtacatactttaggtccgattatccat
aatccgcagatgataagccaccttaacgaattaggtattagtacggttgacaaactggaa
gaaataatagcaggcaaagtcattatccggtcacacggcgttggccccgacatatatgac
caggctgaaagtaagcaattgcaggtagtagatgccacctgtccgcatgtaaagaaggct
caacaagcggcccataatctcttactagcaggctacaaggtagttattgttggcgaacct
caccatcccgaagttcaaagtatccttgcctggacaaaccaagcggcctcagtagtagaa
acacttgccgaggccgaagcgttaccatattattcccgcctgggggtagtagcccaaact
acatttgcggccgatagatttcaagctattgtcacgattttacaagccaaatgccaggaa
ctcaaaattgaacgcaccatttgtacagcaactgatctaaggcagcaagcagccatcaat
ttggcacaaaaagtagacattatgattgttgtcggcggcaaaaatagtgccaacacagct
cgcttggccagtgtctgccaggataccggcaaagctgcttatcacatcgaatcagctaac
gaactacagcctgagtggtttacaggtgtacaaactgccgggattacagcgggagcgtca
acacccgattgggtaattaaggaggtatatgaaaaaatggaagcactaaatatgactgat
attactaaagtagagaatggtagtattatagaaggcactgtggttggtgtccggcatgat
gaggtatttgttgacatcggctataaggcggaaggagttattccgttatcagaactggcc
tacccagcaccacaaacggcgactgaaattgttagtgtaggacaagtcattgaggtgttg
gtgcttgacgccgacagtgctgatggtcaggtcaagctgtccaagatacaagcagataga
atcactgcctgggataaattagagcaagcacttactgacaaactgccgctagaaactaaa
attaccgaagttgttaaagggggcttagtttccagtgttttcggcatacgcggctttatt
ccagcttcccacgttgaccttagatttgtcgaagacttgcagccgtttgtcgggcagact
gttcaggtaatcccgattgaaattgatagggaaaaacaaaaagccgttttatcacgtaag
caacttttagcgcaagaaagagcagtaaaagaaaaagaactgtttgccacactggcagta
ggacaaaacattactggcaaagtaagccgcctgactaactttggcgcgtttgtcgatgtg
ggtggtattgatgggcttatccatatctccgacttgtcgtggcagcgagtaaaaacccca
caagaagttgtcaatgttggcgatgaggtaactgtcgttgttctcaaagttgacccggaa
gcaaaaaaacttgccctcagcttaaaagatttagaacgtgatccctggtatgctacagtt
gaaactttggcagtgggaaccgtcctgactggcacagttagcaagcttgccaaatttggt
gcgtttgttgagcttaaaaaagggattgaaggactggtacatatctccgagatggctgag
cgtcgagtagctagtcctgaagaagtagtcagtgccggtcaacaagtagcggttaagatc
cttgctattgacaaagaaaacaagcggattgctcttagtatcgtccaagccgaacaagat
aaggagcgagcagaattcagcgattatctctcaacccaagctccttcatcgggagttaca
cttggtgataaatttggtcatttattcaagcgggaggactaa
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