Sporomusa silvacetica: SPSIL_031250
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Entry
SPSIL_031250 CDS
T10425
Symbol
fnr
Name
(GenBank) Anaerobic regulatory protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
ssid Sporomusa silvacetica
Pathway
ssid02020
Two-component system
ssid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SPSIL_031250 (fnr)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPSIL_031250 (fnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssid03000
]
SPSIL_031250 (fnr)
Transcription factors [BR:
ssid03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
SPSIL_031250 (fnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
CDC4_D
Motif
Other DBs
NCBI-ProteinID:
XFO66954
UniProt:
A0ABZ3IMM3
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All DBs
Position
3131887..3132567
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AA seq
226 aa
AA seq
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MTKRCMKNLDIFSALSHTDREQIGDLALKKTYRKNELVFTEGVEADSIYLIKSGRVKLYK
ISEDGKEFTLDYLKSEDIFGEVTFFENAVHTMNAVAMEDTFICCCTKELFVKLLSNPQTA
LKIVQYLGKKMNAYTEHMSHTAFKDVKGRVLGVLCRLAESYGRPTGAGLTIALDLTHQDI
GSLVNASRVMVTNVLGELRKEHLVHIDGHRITLPTESITMHQNRDI
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcgatgcatgaaaaatttagatatcttttccgctttaagtcacactgatcga
gaacagattggcgatctcgctcttaagaaaacctaccgtaaaaatgagctggttttcact
gaaggagtcgaggcagactcgatctatctcattaaatccggtagggtgaagctatataag
atatcagaagatggtaaggaatttacgctcgactacttgaaatctgaagacatttttggc
gaagtcacttttttcgagaacgctgtgcataccatgaatgccgtggccatggaagacaca
tttatatgctgttgcactaaggaactctttgtcaagctcttaagcaacccccaaacggcg
ctcaaaattgtccaatatctgggcaaaaaaatgaatgcgtatactgagcacatgtcccac
accgcctttaaagacgtaaaaggcagggtgctaggtgtgctttgccgattggcggagagc
tacgggagaccaaccggtgccggacttaccatagcactggatctcacacatcaggatatc
ggtagccttgtcaacgcctctcgagttatggtgacaaatgtgttaggtgaattacgcaaa
gagcatctggttcatattgatggtcatcgtattaccttgcctactgaaagcattacgatg
catcagaatcgggacatttag
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