Sporomusa silvacetica: SPSIL_031630
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Entry
SPSIL_031630 CDS
T10425
Symbol
nfo
Name
(GenBank) endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ssid Sporomusa silvacetica
Pathway
ssid03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPSIL_031630 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssid03400
]
SPSIL_031630 (nfo)
Enzymes [BR:
ssid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
SPSIL_031630 (nfo)
DNA repair and recombination proteins [BR:
ssid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SPSIL_031630 (nfo)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
UvdE
Motif
Other DBs
NCBI-ProteinID:
XFO66992
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All DBs
Position
complement(3176101..3176964)
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AA seq
287 aa
AA seq
DB search
MFAQFGPAGNPDAFYESGHKASADMPEWLAGQELKAYEYQCSRGVTIKQPTAELVGQKAA
QYGTKLSIHAPYYISLATEDEITATNTQRHFLRTLEVAKWMGADRIVFHIGGPGKGADRR
QAMERAKRSFVKVLEQAEDQGLTGPQLLAETMGKQNQLGSLEEVLELCKLDERVRPAVDF
GHMHAVTGGLYTTSAEFAAVFEKIGEALGSEAAKNLHIHFSPIEFTKAGEKRHWSFGDPY
GPPHEPLLTVIADQGYTPRIICESAGTQAKDAKTMQDYYLAMVKKDF
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcacaatttggaccggcaggaaatccagatgcgttttatgaatctggacataag
gcttcggctgacatgccggaatggttagcaggccaagaacttaaggcctatgagtatcaa
tgtagtcgaggggttactatcaagcagcctacggctgaattggtgggacagaaggccgct
caatatggcactaagcttagtattcatgcgccatattatattagtctggctaccgaagat
gagattactgcaactaacacgcagcggcactttttgcgaacgctggaagtagccaaatgg
atgggagctgaccggattgtgtttcatattggcggcccaggtaaaggtgctgaccggcgt
caggctatggagcgggccaagcgttcgtttgtcaaggttctagaacaagctgaagatcag
ggcttgacaggcccgcaactgttggcagaaactatgggtaagcaaaatcagctggggtcg
cttgaagaagtacttgagctatgtaagctggatgagcgggtccggccagcagtcgatttt
ggccatatgcatgctgtgacaggcggtctatatacgacaagtgcagagtttgccgctgta
tttgaaaaaataggcgaagcacttggatcagaagcggcaaagaatctgcatatccatttc
agccccattgagtttaccaaggcgggcgaaaaacggcattggagttttggtgatccctat
gggccaccgcatgagccattactaactgttatcgctgatcaggggtataccccccggatt
atttgcgagtcagcaggtacccaggcaaaagatgccaaaacgatgcaggattattatttg
gcaatggtgaaaaaggatttttag
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