Sporomusa silvacetica: SPSIL_038610
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Entry
SPSIL_038610 CDS
T10425
Symbol
rnr_1
Name
(GenBank) Ribonuclease R
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ssid Sporomusa silvacetica
Brite
Enzymes [BR:
ssid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
SPSIL_038610 (rnr_1)
Transfer RNA biogenesis [BR:
ssid03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SPSIL_038610 (rnr_1)
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Other DBs
NCBI-ProteinID:
XFO67642
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Position
3923022..3924494
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AA seq
490 aa
AA seq
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MSSTNDRHHRSSLQRIARQVMLERGLFPDFSPQAIAELNALPEDIVKLEKSVHDLRNLLW
CSIDNDDSNDLDQLTVSVVIPGEAVKVLVAIADVDTFVKKSSAIDQHAQHNTTSVYTAAQ
IFPMLPEKLSYDLTSLNYEVDRLAIVIEIVITDNGTILSSDIYRAIVRNRAKLTYNSVAA
WLDGNGPIPQAIAVVPGLADNIRLQYQVAQKLKALRHMHGALDFETIEARPIFDTDEIKD
FEVQKRNSAREIIEDFMIAANGVTARYLEAKKSPSLRRVVRTPKKWEQIVEIARQHNFAL
PRDADPKALEKFLTAAKAADLLRFPDLSLSIIKLMGAGEYVVEVPGDTSFGHFGLAVKDY
AHSTAPNRRYPDLITQRLLKAAISGSPIPYQIDELELLAKHCTYAENVAQKVERQVSKSA
AAILLESRIGEKFDAIITGAAEKGTWARLLHPPVEGKLIGHFAGESVGQRVRVQLIHTNV
EQGHIDFKKI
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtacaaatgatagacaccatcgttccagcctacagcgaattgcgcgtcaggta
atgcttgaaagagggctttttccggacttttctcctcaagctattgccgaactgaacgca
cttcccgaagacattgtcaaacttgaaaaatcagtacatgatctcagaaatcttttatgg
tgttcaatagataatgatgattcgaacgacttggatcagcttaccgtatctgtcgtgata
ccaggagaagccgtgaaggttcttgttgctatcgcagatgtggacacttttgtaaagaag
tcatcagcaatagatcaacatgcacagcataataccacttcggtgtatactgctgcacaa
atatttccaatgcttcctgaaaaactctcgtatgatcttacctcccttaattatgaagta
gatcgacttgccatcgttattgaaattgtcattactgataatggaacaatacttagttca
gatatttatagagcaattgtccgcaatcgtgctaagttaacgtacaacagtgttgctgcc
tggctggacggtaatggaccaataccgcaagcaatagccgtagtgcctgggcttgccgat
aatatccggttgcagtatcaggtagcacaaaagctgaaagcgctccgacatatgcatggt
gcgcttgattttgaaacgatagaagctcgtcctatctttgatactgatgagatcaaagat
ttcgaagtacaaaaacgtaatagtgctagagagataattgaggattttatgattgcggct
aacggtgtaaccgcacggtaccttgaggcaaaaaaatctccgtctctcagacgcgttgtt
cgaacaccaaaaaaatgggagcagatcgtcgagattgctaggcaacataactttgcgttg
cctagagatgccgatccaaaagcgttagaaaaatttctgacagctgcaaaagccgctgat
cttcttcgttttcctgatctttctctcagtattattaagttaatgggtgctggcgaatat
gttgtcgaagttccaggtgacacgtccttcggacactttggcctagcagtcaaagattat
gctcattccacagctcccaaccgcaggtatccggatttaattacgcaacgtttactgaaa
gcagcgatatcaggaagtccgattccttatcaaattgatgaacttgaattgcttgcaaag
cactgcacctatgctgaaaatgtcgcacagaaagtggaacggcaggtatcaaaatccgcc
gcagcgatactgctcgaatcacgaattggggaaaaatttgatgcgatcattactggcgca
gctgaaaaaggaacctgggctcgcctgctacatccacctgttgaaggaaaacttataggc
cactttgcaggcgaaagtgtcggtcagagagttcgagtacaattaatacacacaaatgta
gaacaagggcatattgattttaagaagatataa
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