Sporomusa silvacetica: SPSIL_039960
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Entry
SPSIL_039960 CDS
T10425
Symbol
nagR_4
Name
(GenBank) HTH-type transcriptional repressor NagR
KO
K03710
GntR family transcriptional regulator
Organism
ssid Sporomusa silvacetica
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssid03000
]
SPSIL_039960 (nagR_4)
Transcription factors [BR:
ssid03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SPSIL_039960 (nagR_4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_11
Rrf2
HTH_Crp_2
HTH_DeoR
HTH_41
HTH_5
Polycystin_dom
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
XFO67777
LinkDB
All DBs
Position
complement(4061536..4062234)
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AA seq
232 aa
AA seq
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MSSPIYIQIYKVLKEKIVLGQLKPGDMLLSENELAQQYSTSRPTVRKSLSMIENEGYIYS
YPGKGYYVAVPDHNKYTLVFNELHSGDYSINESKLLEVNVIVADEEIARVLQVPLQRKVI
IIRRLLSVTEEPVAYDVKYLPYYRGKPIVEKEIQYATFPEMVAQKDSAFAIKKELCISIE
YSQPIIEKSLYLKESRPMLVVDQRLFDQQNQPIGWGKTYYKSEYGKIKACSS
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgcctatatatatccagatttataaggttttaaaagaaaaaatagtattgggt
caattaaaaccgggggacatgttattgtcagaaaatgagctggcccagcaatatagtact
agcaggccaaccgttaggaaaagcctgtctatgattgagaacgaagggtatatctattct
tatccgggtaagggttattatgtggctgtgccggatcataataaatatacgcttgtgttt
aatgaattacatagtggcgattatagcatcaatgaaagtaaactcttagaggttaatgtt
attgtggctgatgaagaaattgcacgcgttttacaagtaccgctacagagaaaggttata
ataatacgtcggctattaagtgtaaccgaagaaccggtagcttatgatgtgaaatattta
ccttattatcgaggtaagccgattgttgaaaaagaaatacaatatgcaacctttccagaa
atggtggcacagaaagactctgcatttgctatcaaaaaagaactctgcatatccatagaa
tattctcagccaatcatcgaaaaatcactatatttaaaagaaagccgaccgatgctagtt
gttgatcagcgactatttgatcaacagaaccagcccatcggctggggaaaaacttattat
aaaagtgaatatgggaaaataaaggcttgttcaagctaa
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