Sporomusa silvacetica: SPSIL_040960
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Entry
SPSIL_040960 CDS
T10425
Symbol
frdB
Name
(GenBank) Fumarate reductase iron-sulfur subunit
KO
K00245
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
ssid Sporomusa silvacetica
Pathway
ssid00020
Citrate cycle (TCA cycle)
ssid00190
Oxidative phosphorylation
ssid00620
Pyruvate metabolism
ssid00650
Butanoate metabolism
ssid00720
Other carbon fixation pathways
ssid01100
Metabolic pathways
ssid01110
Biosynthesis of secondary metabolites
ssid01120
Microbial metabolism in diverse environments
ssid01200
Carbon metabolism
ssid02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SPSIL_040960 (frdB)
00620 Pyruvate metabolism
SPSIL_040960 (frdB)
00650 Butanoate metabolism
SPSIL_040960 (frdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
SPSIL_040960 (frdB)
00720 Other carbon fixation pathways
SPSIL_040960 (frdB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SPSIL_040960 (frdB)
Enzymes [BR:
ssid01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SPSIL_040960 (frdB)
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Gene cluster
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Motif
Pfam:
Fer2_3
Fer4_8
Fer4_17
Fer4_7
Fer4
Fer4_18
Fer4_9
Fer4_6
Fer4_10
Fer4_2
Fer2
Fer4_21
Fer4_16
Fer4_3
Fer4_4
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
XFO67877
LinkDB
All DBs
Position
complement(4171824..4172531)
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AA seq
235 aa
AA seq
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MNGKAKIFRFNPLTDTQPYYKEYSFQYEQGMTVLDVVNQIYEEQDTTLAYSYCCRNGHCG
ICGVTVNSKPVLMCKQAAAAELVINPLENISVKKDLIVDREEYEIKRPKLRLFLERQCHA
SQEPEIIDMGKFENFKIASRCVECFCCLSVCPVYKKNPHCFTGPAAFVLEARHLFDPRDE
LNRELLLKSEGIDRCIECRLCSKVCPHNVDPAGLIKKIKARKDHGEDPSDALKKS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaaaggcaaaaatattcagatttaaccccttaactgatacgcaaccgtattat
aaagagtactcatttcaatacgaacagggaatgacagtgttggatgtggtaaatcagatt
tatgaagaacaggatactacgttagcttatagctattgctgcagaaacggacattgcgga
atttgcggtgtaaccgttaattctaaacctgttttaatgtgcaagcaggcagcagcagcc
gagctggttatcaatccattagaaaatatcagtgttaaaaaagaccttatcgtagaccgc
gaggaatatgaaataaagcgtccaaaactgagactatttctcgaaagacagtgccatgcc
agtcaggagccagaaataattgatatggggaaatttgagaattttaaaattgctagtcgg
tgtgtggaatgtttttgctgcttatccgtttgtccggtatataaaaaaaatccgcattgt
ttcaccgggcctgctgcctttgttctggaagcgagacatctcttcgacccaagagatgag
ctaaatcgagaactactcctgaaaagtgaaggcatcgaccgctgtatagaatgcaggtta
tgttccaaggtctgtccgcacaacgttgatccagcaggattgataaaaaaaataaaagct
agaaaggatcacggggaagatccttctgatgcattgaagaaatcgtga
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