Sporomusa silvacetica: SPSIL_041910
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Entry
SPSIL_041910 CDS
T10425
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
ssid Sporomusa silvacetica
Pathway
ssid03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SPSIL_041910 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssid03400
]
SPSIL_041910 (uvrB)
DNA repair and recombination proteins [BR:
ssid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPSIL_041910 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SPSIL_041910 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_19
AAA_5
AAA_22
AAA_7
Microtub_bd
Cas3-like_C_2
UvrD-helicase
PH_GAC
DUF3071
Motif
Other DBs
NCBI-ProteinID:
XFO67971
UniProt:
A0ABZ3IQM3
LinkDB
All DBs
Position
complement(4276564..4278636)
Genome browser
AA seq
690 aa
AA seq
DB search
MATVPKLNTVHHEGSSPFKVEAPFVPTGDQPPAIVQLAAGIDHGDIAQVLLGATGTGKTF
TMAKVIEAVQKPTLVIAHNKTLAAQLASEFKEFFPNNAVEYFVSYYDYYQPEAYIAQTDT
YIEKDAAINDEIDKLRHSATSSLFERRDVIIVASVSCIYGLGSPDEYRGLVLSLRQGQTK
DRDDILRKLVEIQYERNDYNFTRGTFRVRGDIVEIYPAAYGEKALRVELFGDEIERILEI
DTLTGEIITERKHIAVYPASHYVTSRENMLRAVGDIEAELDERLQYLKANNKLLEAQRLE
QRTRYDLEMMLEMGYCSGIENYSRHLTQRQPGESPYTLIDYFPEDFLIVVDESHVTLPQV
RAMYAGDRSRKEALVENGFRLPSAFDNRPLTFDEFGERINQIVYVSATPAAYELKAASQV
VQQIIRPTGLIDPEIEVRPIKGQMDDLLDEIKLRMAVNERVLVTTLTKKMAENLTEYLKG
MGIKVNYLHSDIATIERVEIIRDLRAGVHDVLVGINLLREGLDMPEVSLVTILDADKEGF
LRSDTSLIQTIGRAARNAHGKVIMYADKITDSMRRAMSETNRRREIQMAYNTEHGITPKT
IEKRVKELIETTKVAETPANYKVDRIGNMQRDDMLELAVNLEKEMRQASKLLEFERAAEL
RDMIVELRQKAGVGPVKAKVAGKTAKRQKK
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgtaccaaagctcaatacggttcatcatgaaggcagcagcccttttaaggta
gaagccccgtttgtgcctactggtgaccagccgccagctatcgttcaattggcggcgggg
attgaccacggtgatatagcgcaagtactgctaggagctactggtaccggcaagaccttt
accatggccaaagttattgaagctgtgcaaaaaccaacgctggtgattgcacataataaa
acacttgcggctcaattggccagcgagtttaaagaattttttccgaataatgcggtggag
tatttcgtaagttactatgattactatcagccggaagcctatattgcgcagacagatact
tatattgaaaaggacgctgcgattaatgatgaaatcgataagttgcgtcactcagcaacc
agttcgctgtttgagcgacgggatgtcattattgtggccagtgtgtcgtgcatctatggc
ttaggctcgcctgatgaatatcgggggttagtgctgtcacttaggcaaggacaaactaaa
gatcgggatgacattctgcgcaagcttgtggaaattcagtatgagcgtaacgattataac
tttacccgtggtactttccgggtgcgtggcgatattgttgaaatttatccggcagcatat
ggtgagaaggctttgcgggtagagttatttggcgatgaaatcgagcggattttggaaatc
gataccctaacaggtgaaattatcactgaacgtaaacatattgctgtctatccggcctct
cactatgttacctcacgggaaaacatgctgcgtgcggtaggagatattgaagccgaacta
gatgaacggcttcaatatctcaaggcaaataacaagctattagaagctcagcggcttgag
cagcgcactcgttatgatctggaaatgatgttagaaatgggctattgctcaggaattgag
aactattcccggcatcttacccagcgtcagccaggtgagtcaccctatacgctgatagac
tatttcccggaagactttctcattgtagttgatgagtctcatgttacgctgccacaggtc
agggctatgtacgccggtgaccgttcacgcaaggaagcacttgtggagaatggtttccgt
ttgccgtcagcatttgataaccggccgctgacttttgacgagtttggcgagcggattaat
cagattgtctatgtttcggcaactccggccgcgtatgagctgaaagcagccagtcaggtt
gtccaacagattattcgtccgacaggtcttatcgaccctgaaatcgaggttcgccctatt
aaagggcaaatggacgatttgctggatgaaatcaaattgcggatggcagtcaatgagcgg
gtgcttgtgactacgctaaccaaaaaaatggcggaaaacctaaccgaatatttaaaaggc
atggggattaaggtcaactatcttcactcagatattgcgacaattgagcgggtggagatt
atcagagatttgcgggccggtgtgcatgatgtacttgttggaataaacctgctgcgggaa
ggtctggatatgccggaagtgtcacttgtgacaatcctggacgctgataaagagggtttc
ctgcggtctgatacctcactgattcagaccattggtcgtgcagcccgtaatgcccatggc
aaagttattatgtatgctgataaaattactgattctatgcgccgggccatgagcgagact
aatcgtcgccgggaaattcagatggcctataacacggagcacggcataacccccaaaacc
attgaaaaacgggtaaaagaacttattgaaaccaccaaggtagcggaaactccggctaac
tacaaagtcgaccgcattggtaacatgcagcgggacgatatgttggaactggctgtcaat
ctggagaaagaaatgcgccaggcctctaagttattggagtttgaacgggcggctgagctt
agagatatgattgtcgaactgcggcaaaaggcaggggtgggaccggtaaaggcgaaagtt
gctggtaaaactgctaaacgacagaaaaagtaa
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