Sporomusa silvacetica: SPSIL_042490
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Entry
SPSIL_042490 CDS
T10425
Symbol
degU_3
Name
(GenBank) Transcriptional regulatory protein DegU
KO
K07692
two-component system, NarL family, response regulator DegU
Organism
ssid Sporomusa silvacetica
Pathway
ssid02020
Two-component system
ssid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SPSIL_042490 (degU_3)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPSIL_042490 (degU_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ssid02022
]
SPSIL_042490 (degU_3)
Two-component system [BR:
ssid02022
]
NarL family
DegS-DegU (multicellular behavior control)
SPSIL_042490 (degU_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
HTH_40
Sigma70_r4_2
Sigma70_r4
HTH_24
HTH_23
Sigma70_ECF
HTH_10
B12-binding
HTH_38
BAH
HTH_30
Motif
Other DBs
NCBI-ProteinID:
XFO68029
LinkDB
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Position
complement(4337730..4338398)
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AA seq
222 aa
AA seq
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MPIKIVIADDHALLRQGIKNVLSLEPDLNVIGEAADGEEAISKIESLKPDILLLDVNMPH
MNGLEVTKRLKADNTPVKVIILTIHDDQSYVLEVIKSGADGYLLKDIEPGMLVKAIRLVY
AGQSFIYPTLAKRLFGELSRQDERRAAPPEHCSRKEERLTYREVEVLKLIGRGMNNQEIA
QELFLSEKTVKNHLTNIFRKISVVDRTQAVLYAIKNKIVVLD
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
ttgccaattaaaatagttattgctgacgatcacgcacttctcaggcaaggaattaagaat
gtgctgtctttagaacctgacttgaatgtaattggcgaggcggctgacggcgaagaagcc
attagcaagattgagagcctgaagcctgatatactgttacttgatgtgaatatgccgcat
atgaatgggttggaggtaacgaagcgtctcaaggctgataatacgccggtaaaagttatt
attttgactatacatgatgatcaaagctacgtgcttgaggtcattaagtccggcgcagat
gggtatcttctaaaagacattgagccaggcatgctggttaaggctatccggctggtatat
gcgggtcagtcttttatctacccgacactggcaaagcgattatttggcgagctttctcgc
caggatgagcgaagggcagcgccgccggagcactgcagccgcaaggaggaacggttgaca
taccgtgaagtggaagtgttgaagcttatcgggcggggaatgaataatcaggaaattgcc
caggaactatttttaagtgaaaaaacggtaaagaatcatttgaccaatattttccgtaaa
atcagtgtggtcgaccgcacacaggccgtgttatatgctattaagaacaagattgtagta
ttggattga
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