Sporomusa silvacetica: SPSIL_043760
Help
Entry
SPSIL_043760 CDS
T10425
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ssid Sporomusa silvacetica
Pathway
ssid00260
Glycine, serine and threonine metabolism
ssid00460
Cyanoamino acid metabolism
ssid00630
Glyoxylate and dicarboxylate metabolism
ssid00670
One carbon pool by folate
ssid00680
Methane metabolism
ssid01100
Metabolic pathways
ssid01110
Biosynthesis of secondary metabolites
ssid01120
Microbial metabolism in diverse environments
ssid01200
Carbon metabolism
ssid01230
Biosynthesis of amino acids
ssid01240
Biosynthesis of cofactors
ssid04981
Folate transport and metabolism
Module
ssid_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SPSIL_043760 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SPSIL_043760 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SPSIL_043760 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SPSIL_043760 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SPSIL_043760 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SPSIL_043760 (glyA)
Enzymes [BR:
ssid01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SPSIL_043760 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
XFO68156
LinkDB
All DBs
Position
complement(4468948..4470183)
Genome browser
AA seq
411 aa
AA seq
DB search
MTILAGVDPEVKKAIDLERARQQNKLELIASENFVSKAVMEAQGSVLTNKYAEGYPGHRY
YGGCECVDIVEQLAIDRAKEIFGSEHVNVQPHSGAQANTAVYFAFLKPGDTILGMNLAHG
GHLTHGSPVNISGQYFNVVAYGVNEDTHLIDYDQVAELAYTHKPKMLVAGASAYSRIIDF
ARLGQIARDAGAMFMVDMAHIAGLVAAGFHPSPVPHADIVTTTTHKTLRGPRGGMILCRA
QYAKAIDKAVFPGIQGGPLMHVIAAKAVAFKEALSQEFRLYQGQIIKNAQALAERLKQKG
FTLVSGGTDNHLMLVDLRTQNITGKQAEHLLDEIGVTVNKNAIPNDPASPFVTSGIRIGV
PAVTSRGMVEMDMVAIGDIIAMTLTNPDDSAAQDKARSLVAALCRKYPLYA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgacaatacttgctggagtagatcctgaagtaaaaaaagccattgaccttgaacgcgct
cgtcagcaaaataagctggaacttatcgcgtcggaaaattttgtcagcaaagccgtaatg
gaggcccagggatcagtacttactaataaatatgccgaggggtatcctggacatcgttat
tatggcggctgcgaatgtgttgatattgttgagcaattggccattgacagagccaaagag
atttttggctctgagcatgttaatgtgcagcctcattcaggtgcgcaggctaatacggcc
gtgtactttgcgtttttaaagcctggcgatactattttaggtatgaatcttgcccatggc
ggtcatctaactcacggcagcccagtgaatatttccggacagtactttaatgtagttgcc
tatggtgttaatgaggatactcatcttatcgattatgaccaggtagctgagcttgcttat
acgcataagcccaagatgttggtggctggtgccagcgcctattcgcgaattattgatttt
gcccgactgggacaaattgcccgcgatgcaggggcgatgtttatggtggatatggcgcat
attgccggtttagtggcagctggttttcatcccagcccggtgccgcatgccgatattgtt
accacaacgacccacaagacgctacgcggtccgcgtggcggtatgatcctgtgccgtgcc
cagtatgctaaagccattgataaagctgtattccctggcattcaaggtggcccgttaatg
catgtaattgccgccaaagcagtggcttttaaagaagcacttagccaggaattccgcctc
tatcagggccaaattataaagaatgcccaagctttagccgaacggctcaaacaaaaaggg
tttacgctggtatctggcggcaccgataatcatctgatgctggttgatttgcggacgcaa
aacattaccggtaagcaagccgagcaccttttggatgagatcggcgttacagtcaataaa
aatgctatccctaatgacccagccagtccttttgtgacaagtggtatccgtattggcgtg
ccagcagttacttcccgcgggatggtagagatggatatggtggcaattggtgatattatt
gccatgacactgaccaacccggatgacagcgcagcacaagacaaggcccgctcgctggtg
gctgcgttatgccgcaaatacccattgtatgcataa
DBGET
integrated database retrieval system