Sporomusa silvacetica: SPSIL_054230
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Entry
SPSIL_054230 CDS
T10425
Name
(GenBank) hypothetical protein
KO
K10439
ribose transport system substrate-binding protein
Organism
ssid Sporomusa silvacetica
Pathway
ssid02010
ABC transporters
ssid02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SPSIL_054230
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
SPSIL_054230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssid02000
]
SPSIL_054230
Transporters [BR:
ssid02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
SPSIL_054230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
XFO69192
LinkDB
All DBs
Position
complement(5581258..5582331)
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AA seq
357 aa
AA seq
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MSLVKVIIAVLTLSLLLVGCGSQQTKPADGQKKLVFGMIVKDISTPYIQAFIQGAEKKAQ
ELGVEIVIKDGQGDSDKIMSIMDNFITQNVDGFIMAGAVDLKAIVPGVKRLNEAKIPVMA
LDTSPEGGKVDLFVSFDIKDASKKAAEAFVQGIKDRNGGNVPQGIVVEITGDLRDMFTKE
CSSGFKSVIDQYPQLTIVQGEGKWNNTDSNDRTSDLLTRYGKEIRGIYVQTPDIMGIGVV
SAIEAAGLKAEDFGIAGICIGPEGIDLIKNKKVLAIVEQPAKDSAELAVQYLYNIKTNKP
IPKIGDTVEQKDALWAPAKVVKNPFVDEGAYMILKGSLVPLEVKVDDPRLWENQLNK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttagtaaaggtaattatcgccgtacttacgctgtcattgctgctagtaggttgc
ggctctcagcaaacaaagccggcagatggacagaaaaaactggtatttggtatgattgtt
aaggatataagcacaccatatatccaggcttttattcaaggtgctgagaaaaaggcacaa
gagttaggtgttgaaatagttattaaggatggccaaggcgacagtgacaagattatgtcg
ataatggacaattttatcacgcagaatgtcgatggttttatcatggccggtgctgttgat
ttaaaggcaatcgttccaggggttaagcggttaaatgaggccaagatacctgttatggca
cttgatacttctcctgaaggcggtaaggtagatttatttgtatcgtttgatattaaagat
gccagtaaaaaagcggccgaggcctttgtgcaaggcatcaaagacagaaatggcggcaat
gtcccccaagggattgttgtagaaataactggtgatctgcgagatatgtttaccaaggaa
tgctccagtggatttaagtcagttattgatcaatatccccagttaacaattgtgcaagga
gaaggtaaatggaataataccgattccaatgaccgcacaagtgatttattaacaagatat
ggtaaagaaattcggggaatctatgtgcaaacaccagatattatgggtatcggagtcgta
tcagccattgaagctgctggccttaaggccgaggactttggtattgccggtatctgtatt
ggaccagaaggcatagatttgataaaaaataaaaaagtactggcaatagtagagcagcct
gctaaggattctgctgaacttgctgtacaatatttgtacaatataaaaacaaacaaacct
attccgaagattggtgatacggttgagcagaaggatgccttgtgggcaccggcaaaagtt
gtaaaaaatccttttgttgacgaaggtgcctacatgatactcaaaggatcactggtaccg
ttggaggtaaaggtagatgatccacggttgtgggagaatcaattaaataaataa
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