Staphylococcus simulans: AL483_01975
Help
Entry
AL483_01975 CDS
T04303
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ssif
Staphylococcus simulans
Pathway
ssif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL483_01975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssif03019
]
AL483_01975
03009 Ribosome biogenesis [BR:
ssif03009
]
AL483_01975
Enzymes [BR:
ssif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AL483_01975
Messenger RNA biogenesis [BR:
ssif03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AL483_01975
Ribosome biogenesis [BR:
ssif03009
]
Prokaryotic type
rRNA helicases
AL483_01975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Cas3-like_C_2
Flavi_DEAD
CMS1
INTS5_N
GerD
Motif
Other DBs
NCBI-ProteinID:
AMG95648
LinkDB
All DBs
Position
388800..390308
Genome browser
AA seq
502 aa
AA seq
DB search
MQKFIDLGVSEQTAETLANMGFEEPTPIQNDSIPFALHGLDILGQAQTGTGKTGAFGIPL
IEKVVGKEGVQALILAPTRELAMQVAEQLRAFSRGQRVQVVTVFGGMPIGRQIKALKKGP
QIVVGTPGRVIDHLNRRTLKTNDIHTLIIDEADEMMNMGFIDDMRFIMDHIPSENRQTML
FSATMPKAIQALVQQFMKDPKIVKTMNNEMSDPQIDEYYTIVKELEKFETFTNFLDVHQP
ELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKKGIAVTFVNPIEMDYIRQIEDTNN
RRMKALRPPHRKEVLRARENDIKEKVEKWMNQEHSERLQNISSQLLNEYDDVELVAALLQ
ELVESNDEVEVQLTFEKPLARKGRHNAKGPRRGGKPSNKRSNNKFDNKNRRGKGKFNGKK
QKHDKKDHKKPIKGRTFADMQK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaatttatagacttaggtgtttcagaacaaactgctgaaacgcttgctaatatg
ggcttcgaagaaccgactcctatacaaaatgatagtattccgtttgcattgcacggttta
gatattttaggacaagcgcaaacaggtacaggtaaaacgggagcgtttggtattccgtta
attgagaaagttgtcggaaaagaaggcgtacaagcactgattttagcacctacacgcgaa
cttgcaatgcaagttgcggaacaattacgtgcattcagtcgcggacaacgcgtacaagtc
gtaacagttttcggtggtatgccgatcggacgccaaattaaagcgttgaaaaaaggaccg
caaattgttgtaggtacaccaggacgtgtcattgaccacttgaaccgtcgtacacttaaa
acaaatgatatccacacattaattattgatgaagcggatgaaatgatgaacatgggcttc
atcgacgatatgagattcattatggaccatattccatcagaaaatcgtcaaacaatgttg
ttctcagcaacaatgcctaaagccatccaagctttagtacaacaattcatgaaagaccct
aaaatcgttaaaacaatgaataacgaaatgtcagatccgcaaattgatgaatactacaca
atcgttaaagaattagagaaattcgaaacatttaccaacttcttagatgtccaccaacca
gaattagcaattgtcttcggtcgtacaaaacgtcgtgtagacgaattaacaagtgcatta
atttcaaaaggctacaaagctgaaggtttgcatggtgatattacacaagcaaaacgttta
gaagtcttgaagaaatttaaaaatgaccaaatcgatattttagttgcgacagacgttgca
gcacgtggtttagatatttcaggtgtcagccatgtatacaacttcgacattcctcaagat
actgaaagttatactcaccgtatcggacgtacaggccgtgccggtaaaaaaggtatcgcg
gttacattcgttaatcctattgaaatggactatatccgtcaaatcgaagatacaaataat
agacgtatgaaagcgttaagaccaccacatcgtaaagaagtattacgtgcacgcgaaaat
gatattaaagaaaaagtagaaaaatggatgaatcaagaacattcagaacgtctacaaaat
atctcttctcaattattaaatgaatatgatgatgtagaattagtagctgcattattacaa
gaattagtcgagtcaaatgatgaagtagaagttcaattaacattcgaaaaaccacttgca
cgcaaaggtcgtcataatgcgaaaggtcctcgtcgtggaggcaaaccttctaataaacgt
tcaaacaataaatttgataacaaaaaccgtcgcggtaaaggaaaatttaatggtaaaaaa
caaaaacacgataaaaaagatcataaaaaaccgattaaaggtcgtacattcgcagacatg
caaaaataa
DBGET
integrated database retrieval system
