Staphylococcus simulans: AL483_03410
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Entry
AL483_03410 CDS
T04303
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ssif
Staphylococcus simulans
Pathway
ssif03030
DNA replication
ssif03430
Mismatch repair
ssif03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL483_03410
03430 Mismatch repair
AL483_03410
03440 Homologous recombination
AL483_03410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssif03032
]
AL483_03410
03400 DNA repair and recombination proteins [BR:
ssif03400
]
AL483_03410
Enzymes [BR:
ssif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AL483_03410
DNA replication proteins [BR:
ssif03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AL483_03410
DNA repair and recombination proteins [BR:
ssif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AL483_03410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
DUF5740
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AMG95886
LinkDB
All DBs
Position
660337..663537
Genome browser
AA seq
1066 aa
AA seq
DB search
MKAHLNIHTAYDLLESSLRVSDIVEKAVAEGYQSLALTDRNVLYAVPQFYDACRQADIKP
IIGMTVDLSDGLTELETVLLAKNNQGLKSLYQLSSAIKIQDKRTISTEWLKHYQNDLVII
FKRINAEQMNLAEMFSEHADVFTDHLSSGAAEQLDLNQVWMQEAKYLDEADAETVSALQA
IKNNKALDLVNTGSEQHAHLYSQADIDSLSLSQDIIDNTNDLADQCNITIEYHQSLLPQY
DTPEGTSSKEYLYQLLDNAIKRMNLDTPQYRKRLDYEFDVITKMGYEDYFLIVSDLIHYA
KTQDVMVGPGRGSSAGSLISYLLNITTIDPLKYNLLFERFLNPERVTMPDIDIDFEDTKR
ERVIEYVQKKYGDYHVSGIVTFGHLQAKAVARDVGRIMGFEEKTLSEISHLIPSKLGITL
NEAYDTQAFKDFVHRNHRHELWFKLSRKLEGLPRHTSTHAAGIIINERPLYQYVPLLMED
TGLLTQWTMTEDERLGLLKIDFLGLRNLSIIHQIINQVKKDLNIDIDIESIPFDDEKVFK
MLSLGETTGLFQLESDGVRDALRRLQPQHFEDIVAMTSLYRPGPMEEIPTYIARRHDPSK
VAYLHPDLEPILKSTYGVIIYQEQIMQIASKFAGFSYGEADILRRAMSKKNRAVLENERQ
HFVEGASRNGYSEQLSKQIFDLILKFADYGFPRAHAVSYSKVAYTMAYLKVHYTNYFYAN
ILTNVIGSEKKTEQMIAEAKTMNLKILPPDINESHWYYKAAEQGIYLSLGTIKGVGYQSV
KAIVDERYQNGRYKDFFDFTRRLSGRVKTRKLLEALILVGAFDQFGETRATLLGTLDEVL
DSSSQVEQDALIFDFVTPKLEYQQKEELPDLALSNFEKEYLGFYITKHPMEKLFDSKQFL
GIYKLNNANNHQPVLVQMDTLRRIRTKKGQQMAFATLNDGEHTLDGVIFPDTFQRYETLL
LEEKPFIVKGKFENRNQKHQLIINEIQDLDAYEKTMFEKATRIILRKINVDDLEFDTEPS
ETHQQLPIYFYDEQSNQMRQVGRIERDVDTIERLVEQIDPENIRLM
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcacatctaaatatccacactgcgtatgatttgctagaatctagtctacgtgtt
tctgacattgttgaaaaagcagtcgcagaaggctatcaatcgttggcactgactgataga
aatgtcttgtatgctgtccctcaattttatgatgcatgcagacaagcagacatcaaaccc
attatcggtatgactgtagatttaagtgatggcttaacagagttagaaacagtattatta
gctaaaaataatcaaggattaaaatcgttatatcaactttcttcagcaattaaaatacaa
gataaacgtacgatttctacagaatggctaaaacattaccaaaatgatttagtcattatt
tttaagcgtatcaatgctgaacaaatgaatttagcggaaatgtttagtgaacacgcagat
gtattcacggatcatttaagcagcggtgcagcagaacaattagatttaaatcaagtgtgg
atgcaagaagcaaaatatcttgatgaagcagatgctgaaactgtcagtgcattgcaagca
attaaaaataataaagcgttagacttggtaaatacaggtagcgaacagcatgcccattta
tatagccaagctgatatagatagcttgagtttatctcaagacattattgataatacaaat
gaccttgctgatcaatgtaatattacgattgaatatcatcaatcactgttaccacagtat
gatacacctgaaggtacttcatctaaagaatacttataccaattattagataatgctatt
aaacgtatgaacttagatactcctcagtatagaaaacgtttagattatgagttcgatgtc
attacgaaaatggggtacgaagattatttcctaattgtaagtgatctgattcattacgcg
aaaacacaagatgtcatggtcggtccaggtcgtggttcatctgcaggttctctaatcagt
tacttgttgaatatcacaacgattgacccattaaaatataacttattatttgagcgattt
ttaaatcccgaacgtgtcacaatgccagatattgatatcgactttgaagatacaaaacgt
gaacgtgtgattgaatatgtacaaaaaaaatatggagattaccatgtttcaggtattgtg
acattcggacatttacaagcgaaagcagtcgcaagagatgtaggacgtattatggggttt
gaagaaaaaacactcagtgaaatttcacatttaattccgtctaaattaggtataacttta
aatgaagcttatgacacacaagcatttaaagactttgtgcatcgcaatcataggcatgaa
ttgtggttcaaactcagtaggaaattagaaggattgccgagacatacatcaacacatgcg
gcaggcattattattaacgaacgcccattatatcaatatgtaccattattaatggaagat
acgggtctattaacacagtggacaatgactgaagacgaacgacttggtttgttgaaaatc
gactttttaggtctgagaaatttatccatcattcaccaaatcatcaatcaagtaaagaaa
gatttaaatatcgatattgatatagaatctattccttttgatgatgagaaagtatttaaa
atgttgtcattaggggaaacaaccggattattccaattagaatcagacggtgtcagagat
gcattaagacgtttacagccgcaacattttgaggatattgtcgcaatgacttctttatat
cgtccaggtccaatggaagaaataccgacatatattgctagacgtcatgacccatctaaa
gtggcctatcttcatcctgatttagaaccgatattaaaatccacatacggtgttattatt
tatcaagaacaaatcatgcagattgcaagtaagttcgcagggttcagttatggagaagcg
gatattttacgtcgagcaatgagtaaaaagaatcgggctgtgttggaaaatgaacgtcaa
cactttgtagaaggtgccagtcgaaatggctactcagaacaattaagtaaacaaatcttt
gatttaattcttaaattcgcagattatggtttcccacgtgctcatgcggtgagttattct
aaagtcgcctatacgatggcgtatttaaaagtacattatactaattatttttatgccaat
attttaacgaatgtgattggcagtgagaaaaagactgaacagatgattgctgaagctaaa
acgatgaacttaaagattttacctccagacatcaacgaaagtcattggtattataaagca
gctgaacaaggtatttatttatctttaggtaccatcaaaggtgtcggttatcaaagtgtt
aaagctattgtagatgagcgttatcaaaatggtcgatataaagatttctttgattttaca
cgtcgtttatctgggcgcgttaaaacacgtaagttattagaagcgctcatattagtggga
gcatttgatcaattcggtgaaacacgtgcaaccttattaggaacattagatgaggtttta
gattcatcaagtcaagtcgaacaagatgctttgatttttgactttgtgacaccgaaatta
gagtaccaacaaaaagaagagttgcctgatttagcattaagtaactttgaaaaagaatac
ttaggattttatattacaaaacatccaatggaaaaattgtttgattcaaaacagttttta
ggcatttataaattaaacaatgcgaacaatcatcaacctgtacttgtacaaatggacaca
ctgagacgtattcgtacaaaaaaagggcaacagatggcttttgcgactttaaatgatggt
gagcacacgttagatggtgttattttccctgatacttttcaacgttatgaaacccttcta
ttagaagaaaaaccgtttattgtaaaagggaaattcgaaaatagaaatcaaaagcatcaa
ttaattattaatgaaatacaagatttagatgcatatgaaaaaacgatgtttgaaaaagca
acacgtattatactcagaaaaattaatgttgatgatttagaatttgatactgaaccatct
gaaacacatcaacaacttccaatatatttttatgatgaacagtcaaaccaaatgcggcaa
gttggaagaattgaacgtgatgttgacacgattgaaagattggttgaacaaattgatcct
gaaaatattcgcttaatgtaa
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