Staphylococcus simulans: AL483_03470
Help
Entry
AL483_03470 CDS
T04303
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ssif
Staphylococcus simulans
Pathway
ssif03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AL483_03470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssif03400
]
AL483_03470
Enzymes [BR:
ssif01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AL483_03470
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AL483_03470
DNA repair and recombination proteins [BR:
ssif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AL483_03470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
NFACT_N
DZR_2
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-ProteinID:
AMG95898
LinkDB
All DBs
Position
679789..680661
Genome browser
AA seq
290 aa
AA seq
DB search
MPELPEVEHVKRGIEPFVINQIIESVEFSDKVIDGKASGRDTIIKQIDLPMFKNRTEGYK
ITRVERRSKYILLYLEKDEDKRVLVSHLGMTGGYFVVNDLTEIIVPNYQKHWHVNFKLSN
GKQLIFSDIRRFGEIKNVDDITAYTSFEKMAPEPFDDNAYTHYQKQLALPKYQNKPIKQV
ILDHHVIAGCGNIYACEALFNARIHPKRKVNTLTKQEQKRVFDEVVTVLTLGIEQGGTSI
SDYRHADGQTGHMQEYLNVYKKKICPVCGGPIETEVIGGRNSHFCSNCQK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgaattaccagaagtagagcacgttaaaagagggattgaaccctttgtgatcaat
caaattattgaaagtgttgagttctcggataaagtcatcgatggaaaagcgagcggtaga
gacacaattattaaacaaattgatttgccgatgtttaaaaatcgtacagaaggctataaa
attacacgtgtggaacgcagaagtaaatatattcttttatatttagagaaagatgaagat
aaaagagtattagtcagtcatttaggaatgactggtggctatttcgtagtcaatgactta
acggagattattgtaccgaattatcaaaaacattggcacgtcaatttcaaacttagtaac
ggcaaacaattaatcttttctgatattagacgctttggtgaaattaaaaatgttgatgat
attacagcatacacgtcatttgaaaagatggctccagagccttttgatgacaatgcatac
acacactatcaaaaacaattagcattgccgaagtatcagaataagccgattaaacaagtt
atcttagatcatcatgttattgcaggttgcggtaatatttatgcgtgtgaagctttattt
aatgcacgtattcatccaaaacgcaaagttaatactttaacgaaacaagagcaaaagcgt
gtatttgatgaagtagtgactgttctaacattaggtattgaacaaggcggaaccagcatt
tctgattatcgccatgcagatggtcaaactggacatatgcaggagtatttaaatgtatat
aaaaagaaaatctgtcctgtatgtggcggtccgattgagacagaagtgataggtggcaga
aacagtcatttttgttcaaactgtcaaaaataa
DBGET
integrated database retrieval system
