Staphylococcus simulans: AL483_03695
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Entry
AL483_03695 CDS
T04303
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ssif
Staphylococcus simulans
Pathway
ssif03410
Base excision repair
ssif03430
Mismatch repair
ssif03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AL483_03695 (recJ)
03430 Mismatch repair
AL483_03695 (recJ)
03440 Homologous recombination
AL483_03695 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssif03400
]
AL483_03695 (recJ)
DNA repair and recombination proteins [BR:
ssif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AL483_03695 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AL483_03695 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AL483_03695 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AMG95942
LinkDB
All DBs
Position
726338..728611
Genome browser
AA seq
757 aa
AA seq
DB search
MIKAKYKWDLQSNISEITSDDAKALKLTPIVQKILQSKGVIASSEIKQLLEPSQIQHDPY
ALSDMKKTIERINQALDKKERILVYGDYDADGVTSTSILVSALRELGAEVGWYIPNRFTE
GYGPNEAAFRNAADEGIDLIITVDNGIQGHHEMLVAKELDIDVIITDHHEIGETLPEAYA
IVHPMHPDFDYPFKYLSGAGVALKIAQALLDHPAPEFTALAAIGTVADLVSLTDENRAIV
QQGIKVMNNHPSVAIEALLSQAGYNDAINEETIGFIIGPRLNAVGRLDDVSLAAELLMCE
SAEEAEFLAEQVEHFNQERKDIVQEIADEALEMAQAEVEAGNRFLILAQENWHEGVLGIV
ASRIVETYGLPTIILNIDTAQDFAKGSARSIEQVSMYEMLDKERPLISKFGGHHMAAGMT
LPIENIEKLKTALNAHMAELAKHVDLTPRKKVDLVLSESDITVKNISDIEKLRPFGTDFT
SPVFELDGIQVKQSKGIGQEGKHLKMTLGDSKLQALYWQNGAYAHQLEPNEPLNLIGTLQ
INEWNGNQSPQFMVQDMASEQLQILDFRGKARQHEMHDNASTAEIINAQAEKAHEHQYFY
GDIIEQVYDRYIFKELPLDLETMAQTLKSIQASQIILELNHQHSIYFDGMPQMNHFKACY
KALFMKDEINLEQDGMQLCNYLKIKPPLLIFMLKVFNELDFIENNHGIIKVNKNVDKKDI
TSSKLYQARLKRIDVEKFLLYDDFSKVKLWIKEQLAK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagctaagtataaatgggatttacaatcgaatatatcagaaatcacatcagat
gacgctaaagcattaaagcttacacctatcgtacaaaaaatattacaaagcaaaggtgta
atagcgtcttctgaaatcaaacaattactagaaccatctcaaattcagcatgacccttat
gcgttaagtgatatgaagaaaactattgaacgtatcaatcaagcacttgataaaaaagaa
cgtattttagtttatggagattatgatgctgatggggtaacatctacatctatattagtc
agtgcattaagagaacttggtgcagaagtcggatggtatattccaaatcgatttactgaa
ggatatggaccaaatgaagcagcctttagaaatgcagcggatgaaggtatcgatttgatt
attacagttgataatggtatccaaggtcatcatgaaatgctagtggctaaagaattagac
atagatgtgattattacagatcaccatgaaattggtgaaacgttaccggaagcttatgcg
attgtgcatccgatgcatccagattttgactatccatttaaatacttaagcggtgcaggg
gtcgcattaaaaattgctcaagcattacttgatcatcctgcacctgaatttacagctttg
gcagccatcggtacagttgctgatttggtctcattaacagacgaaaaccgagctattgta
caacaaggtataaaggtgatgaacaatcatccatcagttgccatcgaagcgctgctaagt
caagcagggtataacgacgcgataaacgaagaaacgattggttttataataggaccgcgt
ttgaatgcagtaggccgtctagatgatgtaagtttagcagcggaattgttaatgtgtgaa
agtgcggaagaagcggaattcttagctgagcaagttgaacattttaatcaagaacgaaaa
gatattgttcaagagattgcagacgaagcacttgaaatggcacaagcggaagtagaagct
ggaaaccgcttcttaatccttgcccaagaaaattggcatgaaggtgttcttggcatcgtt
gcctcacgaattgttgaaacatatggcttgccgacgatcattctaaatattgatactgca
caagattttgcgaaaggttctgcacgcagtattgaacaagtttcaatgtatgagatgcta
gataaagaaagaccattgatttcaaaattcggtgggcatcatatggcagcgggaatgact
ttaccaattgagaatatagaaaagcttaaaacagcgttaaatgctcatatggcagaactc
gcaaaacacgtagatttaacacctaggaaaaaagtagatttagtattaagcgaatctgat
attacggttaaaaatatttcagatattgaaaagttacgaccattcggtacagactttact
agtcctgtgtttgaattagatgggattcaagtcaaacaatctaaagggattggtcaagaa
ggcaaacatttaaaaatgacactaggtgattctaagttacaagccctttattggcaaaat
ggtgcatatgcacaccaactagaaccgaacgagcccttaaatttaatcgggactttacaa
ataaatgaatggaatggtaatcaatcgcctcaattcatggtacaagatatggcttcagaa
cagctgcaaattttagacttcagaggcaaagcacgtcaacatgagatgcatgataatgca
tcgactgcagaaattatcaatgcacaggctgaaaaagcacatgaacatcaatatttctat
ggagatataattgaacaagtttatgacagatatatctttaaagagttaccattggattta
gaaaccatggcacaaacattaaagtcaattcaagccagtcaaattattttagagttgaac
catcaacactctatttattttgacggcatgccgcaaatgaaccattttaaggcgtgctat
aaagccttatttatgaaagatgaaatcaacttagaacaagatggaatgcagttatgcaac
tatttaaaaatcaaaccgcctttattgatatttatgctcaaagtctttaatgaattagat
tttattgagaataatcatggtataattaaagtgaataaaaatgtagataaaaaggacatt
acttctagtaagctttatcaagcaagacttaaacggatagatgttgagaaattcttgtta
tatgatgacttttcaaaggtgaaactttggattaaagaacagctagctaagtaa
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