Staphylococcus simulans: AL483_04015
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Entry
AL483_04015 CDS
T04303
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ssif
Staphylococcus simulans
Pathway
ssif02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ssif00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AL483_04015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssif03021
]
AL483_04015
Transcription machinery [BR:
ssif03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AL483_04015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
tify
Motif
Other DBs
NCBI-ProteinID:
AMG96005
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All DBs
Position
790407..791516
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AA seq
369 aa
AA seq
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MSENQVKVVKKQTIDPTLTLEDVKKQLLDKGKKEGHLSHEEVAEKLQNFDMDSDQMDEFF
EQLNDNDINLINEKDSSDTDEKLNPNDLSAPPGVKINDPVRMYLKEIGRVDLLNAQEEIE
LAKRIEQGDEVAKARLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFSK
GFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPAPEEI
GEEMDLPPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEVQSPSDHAAYELLKEQ
LEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSR
SKRLKDFMD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaccaagtgaaagtagtaaaaaaacaaaccatcgatccgacattaactttg
gaagatgtaaaaaaacaattattagataaagggaaaaaagaaggtcatttaagccatgaa
gaagtagcagaaaaactgcaaaacttcgatatggactctgatcaaatggacgagttcttt
gaacaattaaatgataatgatataaatcttattaatgaaaaagacagttctgatacagac
gaaaaacttaatcctaatgatttaagtgcacctccaggtgttaaaatcaacgaccctgta
cgtatgtatttaaaagaaatcggtcgtgttgatttattaaacgcccaagaagaaattgaa
cttgcaaaacgtatcgaacaaggtgatgaagtagctaaagcaagattagcagaagcaaac
ttacgtttagttgtcagcattgctaaaagatacgtaggacgcggtatgttgttcttagac
cttatccaagaaggaaatatgggcttaattaaagcggtagaaaaattcgacttcagtaaa
ggattcaaattttctacgtatgcaacatggtggattcgtcaagcaattacacgtgctatt
gctgaccaagcacgtacaatcagaattccagtacacatggtcgaaacaattaataaattg
attcgtgttcaacgtcaattactacaagatttaggtcgtgatccagcaccagaagaaatt
ggtgaagagatggatttaccaccagaaaaagtacgtgaaatcttaaaaattgcacaagag
cctgtttctttagaaacaccaattggtgaagaagatgacagtcacttaggagatttcatc
gaagaccaagaagtacaaagtccatctgatcacgcagcgtacgagttattgaaagaacaa
ttagaagatgttttagatacactaactgatagagaagaaaacgtattaagattacgtttc
ggtcttgatgatggacgtacaagaacacttgaagaagttggtaaagtattcggtgttaca
agagaacgaattcgtcaaatcgaagctaaagcacttagaaagctaagacatccaagccgt
agcaaacgccttaaagactttatggattaa
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