Staphylococcus simulans: AL483_04990
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Entry
AL483_04990 CDS
T04303
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ssif
Staphylococcus simulans
Brite
KEGG Orthology (KO) [BR:
ssif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssif03400
]
AL483_04990
DNA repair and recombination proteins [BR:
ssif03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AL483_04990
Archaeal homologous recombinant proteins
AL483_04990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
COG4_N
MAD
ABC_tran_Xtn
TPR_1
TPR_8
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AMG96195
LinkDB
All DBs
Position
complement(993580..996618)
Genome browser
AA seq
1012 aa
AA seq
DB search
MRPLTLHLENFGPFLDETIDFSKLEDNELFLISGKTGSGKSMLFDAIVYALFDEASLESR
KGKELRSHFADGKSPMVVTFEFRLKNRLFKVVRQAPFVKEGNKNETKGEALIYEWKNDGY
ELIESRIRQGKEYLIRLLGVNASQFRQLFILPQGEFKKFLFSKSSEKQTILRTLFNTVRF
DHLKKQLEEEIKDEKHQIELRYQTIAQHWQNVDTFEDEHLEYLKTTPSIQTDKLMLYIPE
FETTAETLLKQLTKQKEKEQNEFEKADATYRKALELNQNIKALQQEQEKYQNLTNEVQHI
ESLETLLKQMSEVRPLHQILTTLEQSREDYTQTQERSENLTKQLKQTATQLEESKQQLKQ
LQENQSQIEQTQHFISETQYFYKNASQYQSAYKLIDELTVEVKQLEDALNEHQAHLKQLD
SSHETVQPDYEKVNQLTQKLFEIDNEIKAAEQYQTAFTTYQKQIQNIERLKTKQEENQTA
LNELEEKIKAFNTHQLELDNQETMIRKLQSMLEPGDQCPICGHEITSLSDHVDYEQLRAY
RHELENLQKQRDELKAKAAEFNTEIKIGQQAVNTFEETHGTEKIKVDIEALREQYKDTET
IKQQQQKANAELEEKIKQKQQTKEAIQSLQLKVANQQAELTNQQKLIKAFESNTEYKDVV
AFKNDYKTKEKEVRQYETQQTKLTEKIRELEQNFALKQNSLQSVNERLSELSEQIKNQET
QSNKEMETLGIQSPDEVKNVLEKMSEKASIEQEIKDFRDAQVKLASQIENLKQLIQGQPE
PDLESLEAQLQEAKEKLDVQTRQVNEYEFKIQSNQKEFKALKENITTLQQELADQEEIFR
LSEILSGKNIQKLTLENFVLRYYLNLIIDNANKRFFQMTNQRYKLVRSEAVSVGYSGLDI
EVFDWYSNKSRPISTLSGGESFQAALALALGLSEVVQQESGGITLEAIFIDEGFGTLDQE
TLETALDTLINIKTSGRMVGIISHISELKQRIPSILQIHSNGYQSHAEFRFQ
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgagaccattgacattacatttagaaaacttcgggcctttcttagacgaaacaatagat
ttctctaaactagaggataacgaactgtttttaatcagcggtaaaacagggtcaggaaag
tctatgttatttgatgcgattgtctatgctttgtttgatgaagcttctttagaaagcaga
aaaggcaaagagcttagaagccatttcgcagatggtaaatcaccaatggttgtcacattt
gaatttcgattgaaaaatcgtttatttaaagtcgtccgacaagcaccctttgtgaaagaa
ggaaataaaaacgagacaaaaggcgaagcactaatttacgagtggaaaaatgacggctat
gaacttatagaaagtcgaatcagacaaggaaaagagtatctgatcagattattaggcgtt
aatgccagtcagttcagacaattatttattttgccgcaaggtgaatttaaaaagttttta
ttctctaaaagttctgagaaacaaacaattttacgtacattattcaacacagtacgtttt
gaccacctaaaaaagcaactagaagaagagattaaagatgaaaaacatcaaattgaatta
cgttatcaaacaattgcgcaacattggcaaaatgtagatacttttgaagatgaacattta
gaatatttgaaaacaacaccaagtattcaaacagataaattgatgttatacatcccagaa
tttgaaacaacagctgaaacattattaaaacaactgacaaaacaaaaagaaaaagaacaa
aatgaatttgaaaaagcagatgctacgtatcgtaaagcacttgaactgaatcaaaacatc
aaagcattacaacaagaacaagaaaagtatcaaaacttaacaaatgaagtacaacatatt
gaatcgttagaaacacttttaaaacaaatgagtgaagtgcgtcctttacatcaaattttg
acgacacttgaacaatcgcgtgaagattacacacaaacgcaagaaagatctgaaaattta
actaaacagttaaaacaaactgcaacgcaattagaagaaagtaaacaacagttaaaacaa
ttacaagaaaatcaatcacaaatcgaacaaacacaacattttataagtgaaactcaatat
ttttataaaaatgcatctcaatatcaaagtgcttataaattaatcgatgagctgacagtt
gaagtgaaacaactagaagatgcattaaatgaacatcaagcacatttaaaacaacttgat
tcaagtcatgaaacagttcaaccggattacgaaaaagtaaatcaactaacccagaaactg
ttcgaaattgacaatgaaattaaagcagctgaacaatatcaaactgcctttacgacatat
caaaagcaaatacaaaatattgaacggctaaaaacaaagcaagaagaaaatcaaacggcc
ttaaatgaactagaagaaaaaatcaaagcattcaatacacatcagttagaattagacaat
caagaaacaatgattcgaaaattacaatctatgttagaacctggtgatcaatgtccaatt
tgtggtcatgaaattacatcactgtcagatcatgtagattacgaacaattaagagcttat
cgacatgagcttgaaaacttacaaaaacaaagagatgaattaaaagctaaagcagccgaa
ttcaatacagaaataaaaatcgggcaacaagcagtcaatacgtttgaagaaacacatggc
actgaaaaaatcaaagtggatatagaagcattaagggagcaatataaagatacagaaacc
ataaaacaacaacaacaaaaagctaatgctgaacttgaagagaaaataaagcaaaaacaa
caaactaaagaagcaattcagtcattacagttaaaagtagccaatcaacaagcagaattg
acgaaccagcaaaaactgattaaagcgtttgaatcaaatactgaatataaagatgtagtg
gcatttaaaaatgattataaaactaaagaaaaagaagtccgtcaatatgaaacacaacag
acaaagttaactgaaaaaataagagagcttgaacaaaactttgcattaaaacaaaactcg
cttcaaagtgttaatgagcgtctatcagaactctcagaacaaatcaaaaatcaagaaaca
cagtctaataaagaaatggaaacgctaggtattcaatcaccagatgaagtgaaaaatgtt
ctggaaaaaatgagtgagaaagcatctattgaacaagaaattaaagatttccgtgacgct
caagttaaactagccagccaaattgagaatttaaaacaattgatacaaggacaacctgaa
ccagatttagaaagtttggaagcgcaacttcaagaggcgaaagagaagttagatgtgcaa
acgcgacaagtgaatgaatatgaattcaaaatccaatctaatcaaaaagaatttaaggcg
ttaaaagagaatataacaacgttacagcaagaattagctgatcaagaagagattttcaga
ctttcagaaattttatctggaaaaaatattcaaaaattaacattagaaaacttcgtgttg
agatattacttaaacttgattattgataatgcgaataaacgtttcttccagatgacaaat
caaaggtataaattggtgagaagtgaagcggtgtcagtaggttacagtggattagatata
gaagtctttgactggtattctaataaatcacgaccgattagtacattgtcaggcggagaa
tctttccaagctgcattagccttagcgttaggcttaagtgaagtggtacaacaagaatct
ggcggtattacgttagaagctatctttatcgatgaaggatttggaacgctagaccaagaa
acgttagaaacagcattggatacattgattaatattaaaacatcaggtcgaatggtgggg
attatttctcatatcagcgagttaaaacaacgcattccaagtattttacagattcattca
aatggttatcaaagccatgcagaatttagatttcaataa
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