Staphylococcus simulans: AL483_05370
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Entry
AL483_05370 CDS
T04303
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ssif
Staphylococcus simulans
Pathway
ssif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL483_05370 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssif03019
]
AL483_05370 (pnp)
03016 Transfer RNA biogenesis [BR:
ssif03016
]
AL483_05370 (pnp)
Enzymes [BR:
ssif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AL483_05370 (pnp)
Messenger RNA biogenesis [BR:
ssif03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AL483_05370 (pnp)
Transfer RNA biogenesis [BR:
ssif03016
]
Prokaryotic type
tRNA degradation factors
AL483_05370 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
S1_2
KH-I_KHDC4-BBP
OB_PDCD11
SPATA25
DUF7553
Motif
Other DBs
NCBI-ProteinID:
AMG96270
LinkDB
All DBs
Position
complement(1076732..1078837)
Genome browser
AA seq
701 aa
AA seq
DB search
MSQDKKVFKTEWANRPLTIETGQMAKQANGAVLVRYGDTVVLSTATASKEPRDGDFFPLT
VNYEEKMYAAGKIPGGFKKREGRPADEATLTARLIDRPIRPLFPKGYRHDVQIMNIVLSA
DPDCSPEMAAMIGSSMALSVSDIPFQGPIAGVNVGYVDGQYVINPTVEQKEQSRLDLEVA
GHKDAVNMVEAGASEITEKEMLDAIFFGHEEIKRLVAFQEEIIDYLKPEKSEFIPVERDA
EVEEKVTALTQEKGLKEAIQTFDKKEREENIDAVRDEIIEIFEDEEDPENEALLAEVNAI
LNDLVKEEVRRQIADEKVRPDGRKPDEIRPLESEVGLLPRAHGSGLFTRGQTQALSVLTL
GALSEYQLIDGLGPEVEKRFMHHYNFPNFSVGETGPVRAPGRREIGHGALGERALKYIIP
DTQDFPYTVRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTRDDNYT
ILTDIQGMEDALGDMDFKVAGTKDGITAIQMDIKIDGLTREIIEEALEQARVGRLTILEH
MLQTIDQPRPELSAYAPKVETMTIKPDKIRDVIGPGGKKINEIIDETGVKLDIEQDGTIF
IGAVDQAMINRAREIIEEITREAEVGQTYNAKVKRIEKYGAFVELFPGTDALLHISQIAN
ERIKKVEDVLKLGDSIEVKVTEIDSKGRVNASHRVLLNKEN
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagacaagaaagtgtttaagaccgaatgggcaaaccgtccgttaacaattgaa
actgggcagatggcaaaacaagcaaacggtgcggtactcgtacgttatggggatacagtt
gtattatctactgcgacagcatcaaaagaaccgcgtgatggagatttcttcccattaaca
gttaactatgaagaaaaaatgtatgcagcaggtaaaattcctgggggctttaaaaaacgt
gaaggtcgtccggctgacgaagcaactttaactgcgcgtttaatcgatagaccaatccgt
ccattattccctaaaggttaccgccatgatgttcaaatcatgaatatcgtgttaagtgct
gatccagattgttcaccagaaatggcagcaatgatcggttcatcaatggcattaagtgta
tcagatatcccattccaaggtccgattgcaggggtaaatgtcggttatgttgatggtcaa
tatgtgatcaacccgactgtagaacaaaaagaacaatctcgtttagatttagaagttgca
ggccataaagacgcagtcaacatggttgaagcaggcgcaagcgagattactgaaaaagaa
atgttagatgcaattttcttcggtcatgaagaaatcaagcgtttagtagcgttccaagag
gaaattattgattaccttaaacctgagaaatcagaatttattccagttgaacgtgatgca
gaagtcgaagaaaaagtaactgcattaacacaagaaaaaggtttgaaagaagcaattcaa
acattcgataaaaaagaacgcgaagaaaatatcgacgcagttcgtgacgaaattattgag
attttcgaagatgaagaagatccggaaaacgaagcgttactagctgaagtaaatgcaatc
ttaaatgatttagtaaaagaagaagtccgtcgtcaaatcgcggatgaaaaagtacgacca
gatggacgtaaaccagatgaaattcgtccattagaatctgaagtaggtctattaccgcgt
gcacatggttcaggtttattcactcgtggtcaaacacaagcgttatctgtattgacatta
ggcgcattaagcgaatatcaattaattgacggtttaggacctgaagttgaaaaacgcttt
atgcatcactataacttcccgaacttctcagtaggtgaaacaggtccagttcgtgcacca
ggtcgtcgtgaaatcggacacggtgcattaggcgaacgtgctttgaaatatatcattcct
gacacacaagatttcccatatacagtacgtattgtcagcgaagtgcttgaatcaaacggt
tcatcatcacaagcatctatttgcggttctacacttgctttaatggatgcaggtgtacca
atcaaagcaccagttgctggtattgcgatgggtcttgtaacacgcgatgataactataca
attcttacagatattcaaggtatggaagatgctttaggcgacatggacttcaaagttgcc
ggtactaaagatggtatcacagcaatccaaatggatatcaaaatcgatggtttaactaga
gaaatcattgaagaagctttagaacaagcacgtgtcggtcgtttaacaattctagaacac
atgcttcaaacaatcgatcaaccaagaccagaattaagtgcgtatgcacctaaagttgaa
acaatgacaatcaaaccagacaaaatcagagatgttattggacctggcggtaagaaaatc
aatgaaatcattgatgaaacaggtgttaaactggatatcgaacaagatggtactatcttt
atcggtgcagtagatcaagcgatgatcaatcgtgcgcgtgaaattattgaagaaattaca
cgtgaagcagaagtgggtcaaacatataatgcgaaagttaaacgtattgaaaaatacggt
gcgttcgtagaattattcccaggcactgatgcgttattacacatctcacaaattgcgaat
gagcgtatcaagaaagttgaagatgtattgaaacttggcgactcaattgaagttaaagta
actgaaattgacagtaaaggccgtgtgaatgcatctcaccgtgtattattaaataaagaa
aactaa
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